Table 1. Taxonomic affiliation and isolation information of the isolates belonging to the phylum Actinobacteria.
Suborder Family Genus Strain ID NIBR NO. Most closely related species Similarity (%) Isolation Source Medium Incubation condition
Micrococcineae Cellulomonadaceae Cellulomonas KHH20 RDH8 NIBRBAC000497852 NIBRBAC000498079 Cellulomonas denverensis W6929T Cellulomonas soli Kc 1T 99.64 99.64 Gut of japanese crested ibis Fresh water R2A R2A 25℃, 3d 30℃, 2d
Dermabacteraceae Dermacoccaceae Intrasporangiaceae Brachybacterium Dermacoccus Arsenicicoccus Janibacter Phycicoccus Ho-10 KYW950 LPB0110 KYW1206 HKS12 NIBRBAC000498105 NIBRBAC000497927 NIBRBAC000497985 NIBRBAC000497943 NIBRBAC000498111 Brachybacterium paraconglomeratum LMG 19861T Dermacoccus barathri MT 2T Arsenicicoccus bolidensis CCUG 47306T Janibacter indicus 0704P10-1T Phycicoccus ochangensis L1b-b9T 99.93 100.0 99.92 99.65 99.08 Activated sludge Sea water Sea water Sea water Ginseng R2A MA MA MA R2A 30℃, 2d 25℃, 3d 26℃, 1d 25℃, 4d 30℃, 2d
Microbacteriaceae Agrococcus HKS25 NIBRBAC000498117 Agrococcus lahaulensis DSM 17612T 99.58 cultivated soil Ginseng R2A 30℃, 2d
Humibacter Leifsonia C4-1 HKS09 NIBRBAC000498029 NIBRBAC000498109 Humibacter antri D7-27T Leifsonia lichenia 2Sb T 99.72 98.75 cultivated soil Natural cave Ginseng ISP2 R2A 30℃, 7d 30℃, 2d
Microbacterium C7-7 C1-46 HMF4427 NIBRBAC000498033 NIBRBAC000498021 NIBRBAC000497916 Leifsonia soli TG-S248T Microbacterium aoyamense KV-492T Microbacterium arborescens DSM 20754T 99.25 99.22 99.92 cultivated soil Natural cave Natural cave Fermented food TSA TSA MA 30℃, 4d 30℃, 7d 30℃, 3d
KHC15 NIBRBAC000497842 Microbacterium esteraromaticum DSM 8609T 99.79 Gut of redcrowned crane NA 25℃, 3d
IMCC25612 LPB0100 Ho-14 NIBRBAC000498002 NIBRBAC000497980 NIBRBAC000498106 Microbacterium ketosireducens DSM 12510T Microbacterium marinum H101T Microbacterium oleivorans DSM 16091T 100 100.0 99.64 Fresh water Sea water Activated R2A MA R2A 20°C, 10d 26℃, 1d 30℃, 2d
KHG7 NIBRBAC000497857 Microbacterium paraoxydans CF 36T 99.57 sludge Gut of red- NA 25℃, 3d
Micrococcaceae Mycetocola Arthrobacter Kocuria DO214 IMCC25611 HMF3875 KHK4 IMCC25615 LPB0092 bT304 NIBRBAC000498052 NIBRBAC000498001 NIBRBAC000497900 NIBRBAC000497856 NIBRBAC000498005 NIBRBAC000497975 NIBRBAC000497862 Microbacterium schleiferi IFO 15075T Mycetocola miduiensis MD-T1-10-2T Arthrobacter bergerei CIP 108036T Arthrobacter nicotianae DSM 20123T Kocuria marina KMM 3905T Kocuria palustris DSM 11925T Kocuria rhizophila DSM 11926T 99.69 99.50 99.93 99.78 99.86 99.85 99.08 crowned crane Fresh water Fresh water Soil Gut of redcrowned crane Fresh water Soil Gut of korean R2A R2A R2A TSA R2A MA BHIA 25℃, 2d 20°C, 10d 30℃, 3d 25℃, 3d 20°C, 10d 26℃, 2d 37℃, 3d
native cattle
Nesterenkonia Zhihengliuella UT 4-03 LPB0101 NIBRBAC000498084 NIBRBAC000497981 Nesterenkonia lacusekhoensis IFAM EL-30T Zhihengliuella flava H85-3T 100 99.23 Plant root Sea water TSA MA 30℃, 5d 26℃, 2d
Promicromonosporaceae Sanguibacteraceae Cellulosimicrobium Promicromonospora Sanguibacter KHC19 C6-16 IMCC25604 NIBRBAC000497851 NIBRBAC000498031 NIBRBAC000497994 Cellulosimicrobium funkei ATCC BAA-886T Promicromonospora flava CC 0387T Sanguibacter suarezii ST 26T 99.86 99.16 99.86 Gut of japanese crested ibis Natural cave Fresh water R2A R2A 1/10 MA 25℃, 3d 30℃, 3d 20°C, 10d
Pseudonocardineae Pseudonocardiaceae Saccharopolyspora KYW998 NIBRBAC000497925 Saccharopolyspora endophytica YIM 61095T 99.86 Sea water MA 25℃, 3d
Corynebacterineae Corynebacteriaceae Dietziaceae Mycobacteriaceae Corynebacterium Dietzia Mycobacterium HKS28 Cip10 IMCC25613 C3-50 HKS22 C6-12 NIBRBAC000498118 NIBRBAC000498060 NIBRBAC000498003 NIBRBAC000498028 NIBRBAC000498114 NIBRBAC000498030 Corynebacterium freneyi ISPB 6695110T Corynebacterium marinum 7015T Dietzia timorensis ID 05-A0528T Mycobacterium alvei CIP 103464T Mycobacterium hodleri DSM 44183T Mycobacterium obuense ATCC 27023T 99.63 99.85 99.50 99.29 99.72 99.44 Ginseng cultivated soil Tidal flat Fresh water Natural cave Ginseng cultivated soil Natural cave R2A MA R2A TSA R2A ISP2 30℃, 2d 30℃, 2d 20°C, 10d 30℃, 10d 30℃, 2d 30℃, 3d
Nocardiaceae Rhodococcus C10-13 C6-18 G1 KHO6 C1-60 NIBRBAC000498035 NIBRBAC000498032 NIBRBAC000498066 NIBRBAC000497838 NIBRBAC000498022 Mycobacterium senegalense CIP 104941T Mycobacterium sphagni DSM 44076T Rhodococcus cerastii C5T Rhodococcus fascians LMG 3623T Rhodococcus kronopolitis NEAU-ML 12T 99.00 99.30 99.48 99.00 99.72 agar Natural cave R2A Natural cave R2A Tidal flat R2A Gut of japanese NA crested ibis Natural cave TSA 30℃, 7d 30℃, 16d 30℃, 2d 25℃, 3d 30℃, 3d
Streptomycineae Streptomycetaceae Williamsia Streptomyces C3-42 C2-18 IMCC25607 BK1I29 MGS3Y-3-1 NIBRBAC000498026 NIBRBAC000498023 NIBRBAC000497997 NIBRBAC000498091 NIBRBA0000114269 Rhodococcus wratislaviensis NBRC 100605T Williamsia maris SJS 0289-JS1T Williamsia muralis MA 140/96T Streptomyces cocklensis BK 168T Streptomyces coelicoflavus NBRC 15399T 99.50 99.71 100.00 98.96 100 Natural cave Natural cave Fresh water Plant root Ginseng ISP2 agar TSA R2A ISP2 MA 30℃, 5d 30℃, 9d 20°C, 7d 30℃ 30℃, 3d
cultivated soil
MGS3Y-3-4 HKS20 NIBRBA0000114270 NIBRBAC000498113 Streptomyces colombiensis NRRL B-1990T Streptomyces crystallinus NBRC 15401T 100 99.24 Ginseng cultivated soil Ginseng MA R2A 30℃, 3d 30℃, 1d
TW1K13 TW1K14 BBT-4 Tri-200-1 TW1K20 BBT-7 TW1M1 TW1K17 HKS13 MEC3Y-3-1 TW1S1 MMD3Y-3-3 NIBRBAC000498097 NIBRBAC000498098 NIBRBA0000114215 NIBRBAC000498080 NIBRBAC000498099 NIBRBA0000114216 NIBRBAC000498100 NIBRBAC000498101 NIBRBAC000498112 NIBRBA0000114268 NIBRBAC000498102 NIBRBA0000114279 Streptomyces cyslabdanicus K04-0144T Streptomyces griseoplanus NBRC 12779T Streptomyces kanamyceticus NBRC 13414T Streptomyces laculatispora BK 166T Streptomyces lannensis TA 4-8T Streptomyces lienomycini LMG 20091T Streptomyces lucensis NBRC 13056T Streptomyces mirabilis NBRC 13450T Streptomyces misakiensis NBRC 12891T Streptomyces prunicolor NBRC 13075T Streptomyces puniciscabiei S77T Streptomyces rishiriensis NBRC 13407T 99.56 99.92 99.79 99.86 100 99.93 99.11 99.41 99.37 99.71 99.14 99.79 cultivated soil Soil Soil Black biotite Soil Soil Black biotite Soil Soil Ginseng cultivated soil Ginseng cultivated soil Soil Ginseng cultivated soil ISP2 ISP2 R2A R2A ISP2 R2A ISP2 ISP2 R2A MA ISP2 MA 30℃, 7d 30℃, 7d 25℃, 2d 30℃, 2d 30℃, 7d 25℃, 2d 30℃, 7d 30℃, 7d 30℃, 1d 30℃, 3d 30℃, 7d 30℃, 3d
MK6Y-2-3 NIBRBA0000114273 Streptomyces turgidiscabies ATCC 700248 T 99.16 Ginseng cultivated soil MA 30℃, 3d