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Spatial network
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Show the spatial network. |
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Draw a Voronoi plot of the cell distribution. |
Spatial domain
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Show a Moran scatter plot. |
Spatial tendency
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Plot the tendency curve of the genes. |
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Plot the tendency curve of the gene clusters. |
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Boxplot of gene expression for each cluster is shown |
Cell type proximity
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Use heatmap to display the results of neighbor analysis |
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Use barplot to display infiltration scores and the number of non-parenchymal cells. |
Niche composition
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Show the environment composition of a niche. |
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The heatmap shows the niche composition in each sample, and the bar plot shows the total number of each niche and the total number of cells in each sample, respectively. |
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The heatmap shows the cell composition of each niche, and the bar plot graph shows the number of each niche in all samples. |
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Heatmap show the cell composition of each sample. |
Spatial communication
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Visualize ligand-receptor interactions between two cell types in spatial omics data using network plot. |
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Dotplot for cell communication analysis are presented, either specifying the cell type pairs and ligand-receptor pairs to be presented or showing the most significant cell type pairs and ligand-receptor pairs after ranking by significance level. |
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To map the distribution of ligands and receptors expression of different cell type in a situ map of tissue. |
Tensor decomposition
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Visualizes a factor in the CP decomposition tensor. |
Visualizes a factor in the Tucker decomposition tensor. |
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Visualizes the proportion in a Tucker decomposition. |
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Visualizes the proportion in a CP decomposition. |