SOAPy_st.pl.show_box_plot
- SOAPy_st.pl.show_box_plot(adata: AnnData, cluster_key: str, score_key: str, title: str | None = None, figsize: Tuple[float, float] | None = None, dpi: int = 100, ax: Axes | None = None, show: bool = True, save: str | PathLike | None = None, **kwargs: Any) Axes | None
Boxplot of gene expression for each cluster is shown
Parameters
- adataanndata.AnnData
An AnnData object containing spatial omics data and spatial information.
- figsizeTuple[float, float], optional
(Width, height) of the figure.
- dpifloat, optional
The resolution of the figure.
- titlestr, optional
The title of shown figure.
- axAxes
A matplotlib axes object.
- showbool
Show the plot, do not return axis.
- saveUnion[str, PathLike], optional
The path where the image is stored.
- cluster_key
cluster keyword in adata.obs.index.
- score_key
Gene name in adata.var_names.
- showbool
Show the plot, do not return axis.
- saveUnion[str, PathLike]
The path where the image is stored.
- kwargs
Other params of ax.plot().
Returns