# C extensions
*.so
*.o

# Environments
.env
.venv
env/
venv/
ENV/
env.bak/
venv.bak/

# IDE
.vscode

# Stats
callgrind*
perf*
!perf.codon

# 3rd party # TODO: #4 Add as submodules
seq/
old_seq/
scripts/seqan
scripts/ganon_helpers/seqan3
scripts/ganon_helpers/build
lib/lattigo
external/
deps/

# Network
sock.*

# Go
go.sum

# Data
data/
cache/
tests/data/gwas/input/__*
tests/data/dti/input/__*
tests/data/mhe/*.bin
tests/data/king/*.bin
tests/data/pca/*.bin
results/*.txt
applications/others/lattigo_king/stdout

# Project specific
temp*
paper/
hide.*
obsolete/
log*.txt
_dump*
_encoding*
build/
install/
*.sh.x.c
massif*
sequrex
