taxa_summary.Rd
Data frame with mean, max, median standard deviation of relative abundance.
taxa_summary(x, level)
x |
|
---|---|
level | Taxonomic level for which summary is required |
returns a data frame with relative abundance summary.
# NOT RUN { # Example data library(microbiomeutilities) data("zackular2014") p0 <- zackular2014 p0.rel <- microbiome::transform(p0, "compositional") tx.sum1 <- taxa_summary(p0, "Phylum") tx.sum2 <- taxa_summary(p0.rel, "Phylum") # }