Plots distribution of reads.

plot_read_distribution(x, groups, plot.type = c("density", "histogram"))

Arguments

x

phyloseq-class object

groups

Metadata variable to check for groups based sequencing effort.

plot.type

Either density or histogram plot

Value

A ggplot plot object.

Examples

library(microbiome) data(zackular2014) ps0 <- zackular2014 p <- plot_read_distribution(ps0, groups='DiseaseState', plot.type= 'density')
#> [1] "Done plotting"
print(p)