Run Default
{

    Prefix /bgscratch/bbp/release/02.04.12
    MorphologyPath ../circuit_twocell_example1/morphologies
    METypePath ../circuit_twocell_example1/ccells

    CircuitPath ../circuit_twocell_example1
    nrnPath ../circuit_twocell_example1/ncsFunctionalAllRecipePathways

    CurrentDir ./
    OutputRoot .//output
    TargetFile .//user.target

    CircuitTarget mc2_Layer5
    Duration 100
    Dt 0.025

    BaseSeed 12345
}

Report soma
{
    Target Mosaic
    Type compartment
    ReportOn v
    Unit mV
    Format Bin
    Dt 0.1
    StartTime 0
    EndTime 20000
}

Stimulus spikeReplay
{
    Mode Current
    Delay 0
    Duration 100
    Pattern SynapseReplay
    SpikeFile output/out.dat.original
}

StimulusInject spikeReplayIntooneCell
{
    Stimulus spikeReplay
    Target Mosaic
}

Stimulus ThresholdExc
{
    Mode Current
    Pattern Noise
    MeanPercent 120
    Variance 1.0
    Delay 0.000000
    Duration 20000.000000
}

StimulusInject ThresholdIntoExc
{
    Stimulus ThresholdExc
    Target Excitatory
}

Stimulus hypamp
{
    Mode Current
    Pattern Hyperpolarizing
    Delay 0.0
    Duration 20000.0
}

StimulusInject hypamp_mosaic
{
    Stimulus hypamp
    Target Mosaic
} 

Connection changeUse
{
    Source Excitatory
    Destination Excitatory
    Weight 1.0
    SynapseConfigure %s.Dep = 1.0
    SpontMinis 100.0
    }

Connection scheme_minus2
{
    Source Excitatory
    Destination Excitatory
    Weight 1.0
    SynapseConfigure %s.NMDA_ratio = 0.4
}
