Retrieve Results of an Advanced Search/Query

retrieve_search_results(queryURL)

Arguments

queryURL

URL of a query prepared on BacDive.DSMZ.de/AdvSearch, as explained in the vignette "The semi-automatic approach: retrieving data through a pre-configured advanced search".

Value

A list of lists containing either a single BacDive dataset in case the searchTerm was unambiguous (bacdive_id, sequence, culturecollectionno), or a large list containing all datasets that match an ambiguous searchTerm (most taxons).

Examples

data_miller <- retrieve_search_results(queryURL = "https://bacdive.dsmz.de/advsearch?site=advsearch&searchparams[78][contenttype]=text&searchparams[78][typecontent]=contains&searchparams[78][searchterm]=Miller&advsearch=search")
#> Data download in progress for BacDive-IDs:
#> 132598
#> 133012