scATAcat Documentation
Contents:
src
scATAcat Documentation
Index
Index
A
|
C
|
G
|
M
|
O
|
P
|
S
A
add_binary_layer() (in module scATAcat.helper_functions)
apply_PCA() (in module scATAcat.helper_functions)
apply_TFIDF_sparse() (in module scATAcat.helper_functions)
C
cell_feature_statistics() (in module scATAcat.plot_functions)
G
generate_bulk_AnnData() (in module scATAcat.bulk_data_functions)
generate_bulk_sparse_AnnData() (in module scATAcat.bulk_data_functions)
get_closest_prototype_to_pseudobulk() (in module scATAcat.pseudobulk_functions)
get_closest_pseubulk_to_prototype() (in module scATAcat.pseudobulk_functions)
get_pseudobulk_matrix() (in module scATAcat.pseudobulk_functions)
get_pseudobulk_matrix_ext() (in module scATAcat.pseudobulk_functions)
get_pseudobulk_to_prototype_distance() (in module scATAcat.pseudobulk_functions)
M
module
scATAcat
scATAcat.bulk_data_functions
scATAcat.helper_functions
scATAcat.plot_functions
scATAcat.pseudobulk_functions
O
overlap_vars() (in module scATAcat.helper_functions)
P
plot_cell_statistics() (in module scATAcat.plot_functions)
plot_feature_statistics() (in module scATAcat.plot_functions)
plot_gene_activity_of_UMAP() (in module scATAcat.plot_functions)
plot_pca_dist_cent_heatmap() (in module scATAcat.plot_functions)
plot_pca_dist_heatmap() (in module scATAcat.plot_functions)
preproces_sc_matrix() (in module scATAcat.helper_functions)
preprocess_bulk_adata() (in module scATAcat.bulk_data_functions)
preprocessing_libsize_norm_log2() (in module scATAcat.helper_functions)
preprocessing_standardization() (in module scATAcat.helper_functions)
projection() (in module scATAcat.plot_functions)
S
scATAcat
module
scATAcat.bulk_data_functions
module
scATAcat.helper_functions
module
scATAcat.plot_functions
module
scATAcat.pseudobulk_functions
module
sparse_mean_variance_axis() (in module scATAcat.helper_functions)
subset_adata_obs() (in module scATAcat.helper_functions)
subset_adata_vars() (in module scATAcat.helper_functions)