seismicrna.core.tests package

Submodules

class seismicrna.core.tests.array_test.TestCalcInverse(methodName='runTest')

Bases: TestCase

test_calc_inverse(): Invert an array with a known inverse.

test_calc_inverse_fill_fwd(): Invert an array with a known inverse; fill forward.

test_calc_inverse_fill_fwd_max()

test_calc_inverse_fill_fwd_max_default()

test_calc_inverse_fill_rev(): Invert an array with a known inverse; fill reverse.

test_calc_inverse_fill_rev_max()

test_calc_inverse_fill_rev_max_default()

test_calc_inverse_max(): Invert an array with a known inverse.

test_empty()

test_empty_max()

test_is_inverse(): Verify every position in the inverse of a random array.

test_negative(): Negative values in the target are not permitted.

test_repeated(): Repeated values in the target are not permitted.

class seismicrna.core.tests.array_test.TestEnsureSameLength(methodName='runTest')

Bases: TestCase

test_diff_lengths(): Unequal lengths are not permitted.

test_other_dims(): Non-1D arrays are not valid.

test_same_length(): The length is returned when the arrays share the length.

class seismicrna.core.tests.array_test.TestFindDims(methodName='runTest')

Bases: TestCase

test_0d()

test_0d_1dim()

test_0d_none()

test_0d_nonzero()

test_0d_nonzero_extra()

test_1d()

test_1d_0dim_none()

test_1d_1d_crossed()

test_1d_1d_separate()

test_1d_1dim_none()

test_1d_2d_congruent()

test_1d_2d_crossed()

test_1d_2dim()

test_1d_2dim_none()

test_1d_nonzero()

test_2d()

test_2d_1dim_none()

test_2d_2d_congruent()

test_2d_2d_crossed()

test_2d_nonzero()

test_empty()

test_none_2d()

class seismicrna.core.tests.array_test.TestFindTrueDists(methodName='runTest')

Bases: TestCase

test_all_false()

test_all_true()

test_custom_1()

test_custom_2()

test_vs_slow()

class seismicrna.core.tests.array_test.TestGetLength(methodName='runTest')

Bases: TestCase

test_1d(): A 1D array has a length.

test_other_dims(): Non-1D arrays are not valid.

class seismicrna.core.tests.array_test.TestLocateElements(methodName='runTest')

Bases: TestCase

test_locate_0()

test_locate_1()

test_locate_2()

test_locate_invalid()

class seismicrna.core.tests.array_test.TestTriangular(methodName='runTest')

Bases: TestCase

test_whole_numbers()

class seismicrna.core.tests.header_test.TestClustHeader(methodName='runTest')

Bases: TestCase

test_clustered()

test_clusts()

test_index()

test_iter_clust_indexes()

test_level_keys()

test_level_names()

test_levels()

test_max_order()

test_min_order()

test_modified_max_order()

test_modified_min_order()

test_modified_none()

test_modified_rels()

test_names()

test_num_levels()

test_orders()

test_select_clust()

test_select_clusts()

test_select_extra()

test_select_invalid_clust()

test_select_invalid_order()

test_select_none()

test_select_order()

test_select_order_clust_empty()

test_select_order_clust_exist()

test_select_orders()

test_select_orders_clusts_exist()

test_signature()

class seismicrna.core.tests.header_test.TestConstants(methodName='runTest')

Bases: TestCase

test_average_prefix()

test_clust_name()

test_cluster_prefix()

test_order_name()

test_rel_name()

class seismicrna.core.tests.header_test.TestEqualHeaders(methodName='runTest')

Bases: TestCase

test_clustheaders()

test_different_types()

test_relclustheaders()

test_relheaders()

class seismicrna.core.tests.header_test.TestFormatClustName(methodName='runTest')

Bases: TestCase

test_positive()

test_zero_zero_allowed()

class seismicrna.core.tests.header_test.TestFormatClustNames(methodName='runTest')

Bases: TestCase

test_positive_invalid_dups()

test_positive_no_dups()

test_positive_valid_dups()

test_zero_zero_allowed()

class seismicrna.core.tests.header_test.TestHeader(methodName='runTest')

Bases: TestCase

test_abstract()

class seismicrna.core.tests.header_test.TestIndexClusts(methodName='runTest')

Bases: TestCase

test_valid()

class seismicrna.core.tests.header_test.TestIndexOrderClusts(methodName='runTest')

Bases: TestCase

test_valid()

class seismicrna.core.tests.header_test.TestIndexOrders(methodName='runTest')

Bases: TestCase

test_valid()

class seismicrna.core.tests.header_test.TestIndexOrdersClusts(methodName='runTest')

Bases: TestCase

test_valid()

class seismicrna.core.tests.header_test.TestListClusts(methodName='runTest')

Bases: TestCase

test_negative()

test_positive()

test_zero()

class seismicrna.core.tests.header_test.TestListOrderClusts(methodName='runTest')

Bases: TestCase

test_positive()

test_zero()

class seismicrna.core.tests.header_test.TestListOrders(methodName='runTest')

Bases: TestCase

test_negative_none()

test_negative_positive()

test_negative_zero()

test_positive_none()

test_positive_positive()

test_positive_zero()

test_zero_none()

test_zero_one()

test_zero_two()

test_zero_zero()

class seismicrna.core.tests.header_test.TestListOrdersClusts(methodName='runTest')

Bases: TestCase

test_positive_none()

test_positive_positive()

test_zero_none()

test_zero_one()

class seismicrna.core.tests.header_test.TestMakeHeader(methodName='runTest')

Bases: TestCase

test_all()

test_max_order()

test_min_order()

test_none()

test_rels()

class seismicrna.core.tests.header_test.TestParseHeader(methodName='runTest')

Bases: TestCase

test_clust()

test_extra_index_names()

test_extra_values()

test_invalid_numeric()

test_missing_index_names()

test_missing_values()

test_none()

test_nonnumeric()

test_rel_index()

test_rel_index_invalid_name()

test_rel_index_repeated()

test_rel_index_valid_name()

test_rel_multiindex()

test_relclust()

class seismicrna.core.tests.header_test.TestRelClustHeader(methodName='runTest')

Bases: TestCase

test_clustered()

test_index()

test_iter_clust_indexes()

test_level_keys()

test_level_names()

test_levels()

test_modified_all()

test_modified_empty_rels()

test_modified_max_order()

test_modified_max_order_0()

test_modified_none()

test_modified_nullified()

test_modified_rels()

test_num_levels()

test_select_clust()

test_select_extra()

test_select_extra_emptystr()

test_select_extra_none()

test_select_extra_zero()

test_select_invalid_clust()

test_select_invalid_order()

test_select_invalid_rel()

test_select_none()

test_select_order()

test_select_order_clust_empty()

test_select_order_clust_exist()

test_select_rel()

test_signature()

class seismicrna.core.tests.header_test.TestRelHeader(methodName='runTest')

Bases: TestCase

test_clustered()

test_clusts()

test_index()

test_iter_clust_indexes()

test_level_keys()

test_level_names()

test_levels()

test_max_order()

test_min_order()

test_modified_empty_rels()

test_modified_max_order()

test_modified_min_order()

test_modified_none()

test_modified_rels()

test_names()

test_num_levels()

test_orders()

test_rels_duplicated()

test_rels_empty()

test_rels_normal()

test_select_extra()

test_select_extra_zero()

test_select_invalid()

test_select_none()

test_select_one_rels()

test_select_rel()

test_select_two_rels()

test_signature()

test_size()

class seismicrna.core.tests.header_test.TestValidateOrderClust(methodName='runTest')

Bases: TestCase

test_float_clust()

test_float_order()

test_negative_zero_allowed()

test_one_zero_allowed()

test_one_zero_unallowed()

test_positive_positive()

test_zero_negative_allowed()

test_zero_one_allowed()

test_zero_one_unallowed()

test_zero_zero_allowed()

test_zero_zero_unallowed()

class seismicrna.core.tests.stats_test.TestCalcBetaMV(methodName='runTest')

Bases: TestCase

test_scipy_beta()

class seismicrna.core.tests.stats_test.TestCalcBetaParams(methodName='runTest')

Bases: TestCase

test_invert()

class seismicrna.core.tests.stats_test.TestCalcDirichletMV(methodName='runTest')

Bases: TestCase

test_scipy_dirichlet()

class seismicrna.core.tests.stats_test.TestCalcDirichletParams(methodName='runTest')

Bases: TestCase

test_invert()

seismicrna.core.tests.stats_test.rand_dirichlet_alpha(n: int): Simulate n alpha parameters for a Dirichlet distribution.

class seismicrna.core.tests.version_test.TestFormatVersion(methodName='runTest')

Bases: TestCase

test_format_default()

test_format_notag()

test_format_prtag()

class seismicrna.core.tests.version_test.TestParseVersion(methodName='runTest')

Bases: TestCase

test_invalid_1()

test_invalid_2()

test_invalid_3()

test_invalid_4()

test_invalid_5()

test_parse_default()

test_parse_notag()

test_parse_prtag_letter()

test_parse_prtag_letters()

test_parse_prtag_letters_numbers()