Input options: 
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*   chemical_potentials section
*********************
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As rich:
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    {'As': -5.392, 'Bi': -4.565, 'Ga': -4.2543}
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Ga rich:
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    {'As': -6.0383, 'Bi': -4.565, 'Ga': -3.608}
*********************
*   defects section
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coord_type:
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    fractional
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defects:
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    {'group1': {'threshold': 0.0001, 'charge': [-3, -2, -1, 0], 'coord_type': 'fractional', 'subdefect_1': {'symbol': 'Ga', 'type': 'vacancy', 'coordinates': array([ 0.,  0.,  0.])}}, 'group3': {'threshold': 0.0001, 'charge': [0, 1, 2], 'coord_type': 'fractional', 'subdefect_1': {'symbol': 'As', 'type': 'antisite', 'coordinates': array([ 0.,  0.,  0.])}}, 'group2': {'threshold': 0.0001, 'charge': [0], 'coord_type': 'fractional', 'subdefect_2': {'symbol': 'Ga', 'type': 'vacancy', 'coordinates': array([ 0.,  0.,  0.])}, 'subdefect_1': {'symbol': 'Bi', 'type': 'substitution', 'coordinates': array([ 0.25,  0.25,  0.25])}}}
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num_defects:
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    3
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*   ingredients section
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global:
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    {'mast_exec': '//share/apps/vasp5.2_cNEB > vasp.out', 'mast_pp_setup': {'Bi': 'Bi_d', 'Ga': 'Ga_d'}, 'mast_write_method': 'write_singlerun', 'mast_complete_method': 'complete_singlerun', 'mast_xc': 'PBE', 'lcharg': 'False', 'mast_ready_method': 'ready_singlerun', 'mast_queue': 'default', 'ispin': '2', 'mast_run_method': 'run_singlerun', 'encut': '313', 'mast_ppn': '1', 'mast_update_children_method': 'give_structure', 'mast_program': 'vasp', 'mast_kpoints': [2, 2, 2], 'lwave': 'False'}
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inducedefect:
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    {'mast_exec': '//share/apps/vasp5.2_cNEB > vasp.out', 'mast_pp_setup': {'Bi': 'Bi_d', 'Ga': 'Ga_d'}, 'mast_write_method': 'no_setup', 'mast_complete_method': 'complete_structure', 'mast_xc': 'PBE', 'mast_ready_method': 'ready_structure', 'mast_queue': 'default', 'mast_run_method': 'run_defect', 'mast_program': 'vasp', 'encut': '313', 'lcharg': 'False', 'mast_update_children_method': 'give_structure', 'mast_kpoints': [2, 2, 2], 'mast_ppn': '1', 'ispin': '2', 'lwave': 'False'}
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optimize:
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    {'mast_exec': '//share/apps/vasp5.2_cNEB > vasp.out', 'mast_pp_setup': {'Bi': 'Bi_d', 'Ga': 'Ga_d'}, 'mast_write_method': 'write_singlerun', 'mast_complete_method': 'complete_singlerun', 'mast_xc': 'PBE', 'mast_ready_method': 'ready_singlerun', 'mast_queue': 'default', 'mast_run_method': 'run_singlerun', 'mast_program': 'vasp', 'encut': '313', 'lcharg': 'False', 'mast_update_children_method': 'give_structure', 'ibrion': '2', 'mast_ppn': '1', 'ispin': '2', 'lwave': 'False', 'mast_kpoints': [2, 2, 2], 'nsw': '100'}
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static:
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    {'mast_exec': '//share/apps/vasp5.2_cNEB > vasp.out', 'mast_pp_setup': {'Bi': 'Bi_d', 'Ga': 'Ga_d'}, 'mast_write_method': 'write_singlerun', 'mast_complete_method': 'complete_singlerun', 'mast_xc': 'PBE', 'mast_ready_method': 'ready_singlerun', 'mast_queue': 'default', 'mast_run_method': 'run_singlerun', 'mast_program': 'vasp', 'encut': '313', 'lcharg': 'False', 'mast_update_children_method': 'give_structure', 'ibrion': '-1', 'mast_ppn': '1', 'ispin': '2', 'lwave': 'False', 'mast_kpoints': [2, 2, 2], 'nsw': '0'}
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*   mast section
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system_name:
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    GaAs_defects
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*   recipe section
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recipe_file:
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    /home/tam/tammast/recipe_templates/recipe_defects.txt
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*   structure section
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atom_list:
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    None
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coord_type:
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    cartesian
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coordinates:
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    None
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lattice:
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    None
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posfile:
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    /home/tam/tammast/test/defecttest_notupdated/POSCAR.ga4as4
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primitive:
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    False
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spacegroup:
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    None
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structure:
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    Structure Summary (As4 Ga4)
Reduced Formula: GaAs
abc   :   5.626600   5.626600   5.626600
angles:  90.000000  90.000000  90.000000
Sites (8)
1 Ga     0.000000     0.000000     0.000000
2 Ga     0.500000     0.500000     0.000000
3 Ga     0.000000     0.500000     0.500000
4 Ga     0.500000     0.000000     0.500000
5 As     0.250000     0.250000     0.250000
6 As     0.750000     0.750000     0.250000
7 As     0.250000     0.750000     0.750000
8 As     0.750000     0.250000     0.750000
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symmetry_only:
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    False
