Volcano plot — plot_volcano • bcbioRnaseq

Volcano plot

plot_volcano(bcbio, res, lfc = 1, text_labels = 20)

Arguments

bcbio: bcbio list object
res: DESeqResults object
lfc: Log fold change ratio (base 2) cutoff for coloring
text_labels: Number of text labels to plot

Value

Volcano plot

Examples

## Not run: ------------------------------------
# plot_volcano(bcbio,
#              res,
#              alpha = 0.05,
#              lfc = 1)
## ---------------------------------------------