Results: /Users/cjm/repos/semantic-llama/tests/input/cases/treatment-eds.txt

Input

Disease: Ehlers Danlos Syndrome Treatment: The care of patients with EDS is generally focused on implementing preventative measures against serious or life-threatening complications. The primary complications seen in EDS involve the skin, musculoskeletal, and cardiovascular systems. Patient skin is velvety thin, loose, and stretchable. This predisposes patients to difficulties with wound healing. For both accidental and surgical wounds, deep stiches are applied generously. Superficial stiches are placed to carefully realign the skin to prevent scarring. Stiches are also left in for extended periods of time to allow best strengthening of the forming scar tissue. Ascorbic acid (Vitamin C) may be recommended to help reduce the easy bruising that accompanies EDS. Hypermobile joints easily dislocate. With each dislocation, subsequent dislocations are increasingly likely, therefore prevention is particularly important for quality of life. Heavy sports, lifting, and other strenuous efforts should be avoided due to the risk of inciting trauma. Blood vessel fragility increases the risk for serious bleeds and dissections. High blood pressure (hypertension) puts additional strain on the fragile vasculature and increases the risk for complications. Regular screening for hypertension and arterial disease should be conducted and treatment should be initiated early on. The best approaches to screening are by non-invasive technology: ultrasound, MRI, or CT. Arteriography, colonoscopy, and other similarly invasive screening procedures should be considered carefully for benefit versus risk. Surgery for non-life threatening conditions should also be carefully considered. Pregnancies should be followed by obstetricians that are well trained in dealing with high-risk pregnancies. Delivery can progress very quickly in EDS patients and it is yet unclear if there is an advantage to mothers to deliver by vaginal or cesarean routes. Expectant mothers with known aortic root dilations should have echocardiograms each trimester to observe for possible exacerbation. All EDS-affected individuals should seek immediate medical attention for any sudden or unexplained pains and consider wearing a MedicAlert bracelet to communicate their status as a patient with EDS should they lose consciousness. hEDS patients may especially benefit from physical therapy, low-resistance exercise, and assistive devices like braces, wheelchairs, and scooters. Comfortable writing utensils and a low-stress mattress serve an important role in reducing musculoskeletal pain. Pain management is tailored to the individual. Gastrointestinal and psychological complications are likewise managed per an individual’s needs. In addition to physical therapy and low-resistance exercise, calcium and vitamin D can help maximize bone density. DEXA bone density scans should be conducted every other year. kEDS patients should have routine eye exams as they are at risk for globus rupture, retinal detachment and glaucoma. dEDS patients may benefit from protective bandages over exposed areas such as the skin of the elbows and knees.

Results

disease

Ehlers Danlos Syndrome MONDO:0020066

drugs

treatments

treatment_mechanisms

treatment_efficacies

YAML Object

extracted_object:
  disease: MONDO:0020066
  drugs:
  - Ascorbic Acid (Vitamin C)
  treatment_efficacies:
  - efficacy: effective
    treatment: Ascorbic Acid (Vitamin C)
  - efficacy: effective
    treatment: MAXO:0000011
  - efficacy: effective
    treatment: Low-resistance exercise
  - efficacy: effective
    treatment: Calcium and vitamin D
  - efficacy: effective
    treatment: Routine eye exams
  - efficacy: effective
    treatment: Protective bandages
  treatment_mechanisms:
  - mechanism: GO:0042060
    treatment: Deep stiches
  - mechanism: NCIT:C34483
    treatment: Superficial stiches
  - mechanism: NCIT:C143345
    treatment: Ascorbic Acid (Vitamin C)
  - mechanism: NCIT:C15405
    treatment: Avoidance of heavy sports, lifting, and other strenuous efforts
  - mechanism: arterial screening
    treatment: HP:0000822
  - mechanism: screening*screening
    treatment: Non-invasive technology
  - mechanism: NCIT:C15405
    treatment: MAXO:0000004
  - mechanism: NCIT:C48261
    treatment: Monitoring during pregnancy
  - mechanism: NCIT:C3244
    treatment: MAXO:0000011
  - mechanism: NCIT:C3244
    treatment: Low-resistance exercise
  - mechanism: NCIT:C3244
    treatment: NCIT:C157792
  - mechanism: NCIT:C3244
    treatment: writing utensils
  - mechanism: NCIT:C3244
    treatment: Low-stress mattress
  - mechanism: NCIT:C15292
    treatment: MAXO:0000457
  - mechanism: NCIT:C61545
    treatment: Calcium and vitamin D
  - mechanism: NCIT:C61545
    treatment: DEXA bone density scans
  - mechanism: globus rupture
    treatment: Routine eye exams
  - mechanism: null
    treatment: NCIT:C26874
  - mechanism: NCIT:C18902
    treatment: NCIT:C26782
  - mechanism: protection
    treatment: Protective bandages
  treatments:
  - Preventative measures
  - Deep stiches
  - Superficial stiches
  - Ascorbic Acid (Vitamin C)
  - Avoidance of heavy sports, lifting, and other strenuous efforts
  - Screening for hypertension and arterial disease
  - Non-invasive technology screening
  - Careful consideration of surgery for non-life threatening conditions
  - Monitoring during pregnancy
  - MAXO:0000011
  - Low-resistance exercise
  - NCIT:C157792
  - Comfortable writing utensils
  - Low-stress mattress
  - MAXO:0000457
  - Calcium and vitamin D
  - DEXA bone density scans
  - Routine eye exams
  - Protective bandages
input_id: /Users/cjm/repos/semantic-llama/tests/input/cases/treatment-eds.txt
input_text: "Disease: Ehlers Danlos Syndrome\nTreatment:\nThe care of patients with\
  \ EDS is generally focused on implementing preventative measures against serious\
  \ or life-threatening complications. The primary complications seen in EDS involve\
  \ the skin, musculoskeletal, and cardiovascular systems. Patient skin is velvety\
  \ thin, loose, and stretchable. This predisposes patients to difficulties with wound\
  \ healing. For both accidental and surgical wounds, deep stiches are applied generously.\
  \ Superficial stiches are placed to carefully realign the skin to prevent scarring.\
  \ Stiches are also left in for extended periods of time to allow best strengthening\
  \ of the forming scar tissue. Ascorbic acid (Vitamin C) may be recommended to help\
  \ reduce the easy bruising that accompanies EDS. Hypermobile joints easily dislocate.\
  \ With each dislocation, subsequent dislocations are increasingly likely, therefore\
  \ prevention is particularly important for quality of life. Heavy sports, lifting,\
  \ and other strenuous efforts should be avoided due to the risk of inciting trauma.\
  \ Blood vessel fragility increases the risk for serious bleeds and dissections.\
  \ High blood pressure (hypertension) puts additional strain on the fragile vasculature\
  \ and increases the risk for complications. Regular screening for hypertension and\
  \ arterial disease should be conducted and treatment should be initiated early on.\
  \ The best approaches to screening are by non-invasive technology: ultrasound, MRI,\
  \ or CT. Arteriography, colonoscopy, and other similarly invasive screening procedures\
  \ should be considered carefully for benefit versus risk. Surgery for non-life threatening\
  \ conditions should also be carefully considered. Pregnancies should be followed\
  \ by obstetricians that are well trained in dealing with high-risk pregnancies.\
  \ Delivery can progress very quickly in EDS patients and it is yet unclear if there\
  \ is an advantage to mothers to deliver by vaginal or cesarean routes. Expectant\
  \ mothers with known aortic root dilations should have echocardiograms each trimester\
  \ to observe for possible exacerbation. All EDS-affected individuals should seek\
  \ immediate medical attention for any sudden or unexplained pains and consider wearing\
  \ a MedicAlert bracelet to communicate their status as a patient with EDS should\
  \ they lose consciousness.\n\nhEDS patients may especially benefit from physical\
  \ therapy, low-resistance exercise, and assistive devices like braces, wheelchairs,\
  \ and scooters. Comfortable writing utensils and a low-stress mattress serve an\
  \ important role in reducing musculoskeletal pain. Pain management is tailored to\
  \ the individual. Gastrointestinal and psychological complications are likewise\
  \ managed per an individual\u2019s needs. In addition to physical therapy and low-resistance\
  \ exercise, calcium and vitamin D can help maximize bone density. DEXA bone density\
  \ scans should be conducted every other year. kEDS patients should have routine\
  \ eye exams as they are at risk for globus rupture, retinal detachment and glaucoma.\
  \ dEDS patients may benefit from protective bandages over exposed areas such as\
  \ the skin of the elbows and knees.\n"
input_title: null
named_entities:
- id: MONDO:0007947
  label: Marfan Syndrome
- id: CHEBI:8499
  label: Propranolol
- id: CHEBI:2904
  label: Atenolol
- id: CHEBI:6541
  label: Losartan
- id: CHEBI:35530
  label: Beta-blockers
- id: NCIT:C66930
  label: Angiotensin receptor blockers
- id: NCIT:C16567
  label: Exercise
- id: CHEBI:35530
  label: Beta-blockers
- id: CHEBI:35530
  label: Beta-blockers
- id: MONDO:0020066
  label: Ehlers Danlos Syndrome
- id: MAXO:0000011
  label: Physical therapy
- id: NCIT:C157792
  label: Assistive devices
- id: MAXO:0000457
  label: Pain management
- id: GO:0042060
  label: Wound healing
- id: NCIT:C34483
  label: scarring
- id: NCIT:C143345
  label: bruising
- id: NCIT:C15405
  label: prevention
- id: HP:0000822
  label: hypertension
- id: MAXO:0000004
  label: surgery
- id: NCIT:C15405
  label: prevention
- id: NCIT:C48261
  label: screening
- id: MAXO:0000011
  label: Physical therapy
- id: NCIT:C3244
  label: musculoskeletal pain
- id: NCIT:C3244
  label: musculoskeletal pain
- id: NCIT:C157792
  label: Assistive devices
- id: NCIT:C3244
  label: musculoskeletal pain
- id: NCIT:C3244
  label: musculoskeletal pain
- id: NCIT:C3244
  label: musculoskeletal pain
- id: MAXO:0000457
  label: Pain management
- id: NCIT:C15292
  label: Palliative care
- id: NCIT:C61545
  label: bone density
- id: NCIT:C61545
  label: bone density
- id: NCIT:C26874
  label: Retinal detachment
- id: NCIT:C26782
  label: Glaucoma
- id: NCIT:C18902
  label: N/A
- id: MAXO:0000011
  label: Physical therapy
prompt: 'Split the following piece of text into fields in the following format:


  treatment: <the value for treatment>

  efficacy: <the value for efficacy>



  Text:

  Protective bandages*effective


  ===


  '
raw_completion_output: 'Disease: Ehlers Danlos Syndrome

  Drugs: Ascorbic Acid (Vitamin C)

  Treatments: Preventative measures; Deep stiches; Superficial stiches; Ascorbic Acid
  (Vitamin C); Avoidance of heavy sports, lifting, and other strenuous efforts; Screening
  for hypertension and arterial disease; Non-invasive technology screening; Careful
  consideration of surgery for non-life threatening conditions; Monitoring during
  pregnancy; Physical therapy; Low-resistance exercise; Assistive devices; Comfortable
  writing utensils; Low-stress mattress; Pain management; Calcium and vitamin D; DEXA
  bone density scans; Routine eye exams; Protective bandages

  Treatment Mechanisms: Deep stiches*wound healing; Superficial stiches*scarring;
  Ascorbic Acid (Vitamin C)*bruising; Avoidance of heavy sports, lifting, and other
  strenuous efforts*prevention; Screening for hypertension and arterial disease*arterial
  screening; Non-invasive technology screening*screening; Careful consideration of
  surgery for non-life threatening conditions*prevention; Monitoring during pregnancy*screening;
  Physical therapy*musculoskeletal pain; Low-resistance exercise*musculoskeletal pain;
  Assistive devices*musculoskeletal pain; Comfortable writing utensils*musculoskeletal
  pain; Low-stress mattress*musculoskeletal pain; Pain management*palliative care;
  Calcium and vitamin D*bone density; DEXA bone density scans*bone density; Routine
  eye exams*globus rupture; Retinal detachment; Glaucoma; Protective bandages*protection

  Treatment Efficacies: Ascorbic Acid (Vitamin C)*effective; Physical therapy*effective;
  Low-resistance exercise*effective; Calcium and vitamin D*effective; Routine eye
  exams*effective; Protective bandages*effective'

Prompt

Split the following piece of text into fields in the following format:

treatment: <the value for treatment>
efficacy: <the value for efficacy>


Text:
Protective bandages*effective

===


Completion

Disease: Ehlers Danlos Syndrome
Drugs: Ascorbic Acid (Vitamin C)
Treatments: Preventative measures; Deep stiches; Superficial stiches; Ascorbic Acid (Vitamin C); Avoidance of heavy sports, lifting, and other strenuous efforts; Screening for hypertension and arterial disease; Non-invasive technology screening; Careful consideration of surgery for non-life threatening conditions; Monitoring during pregnancy; Physical therapy; Low-resistance exercise; Assistive devices; Comfortable writing utensils; Low-stress mattress; Pain management; Calcium and vitamin D; DEXA bone density scans; Routine eye exams; Protective bandages
Treatment Mechanisms: Deep stiches*wound healing; Superficial stiches*scarring; Ascorbic Acid (Vitamin C)*bruising; Avoidance of heavy sports, lifting, and other strenuous efforts*prevention; Screening for hypertension and arterial disease*arterial screening; Non-invasive technology screening*screening; Careful consideration of surgery for non-life threatening conditions*prevention; Monitoring during pregnancy*screening; Physical therapy*musculoskeletal pain; Low-resistance exercise*musculoskeletal pain; Assistive devices*musculoskeletal pain; Comfortable writing utensils*musculoskeletal pain; Low-stress mattress*musculoskeletal pain; Pain management*palliative care; Calcium and vitamin D*bone density; DEXA bone density scans*bone density; Routine eye exams*globus rupture; Retinal detachment; Glaucoma; Protective bandages*protection
Treatment Efficacies: Ascorbic Acid (Vitamin C)*effective; Physical therapy*effective; Low-resistance exercise*effective; Calcium and vitamin D*effective; Routine eye exams*effective; Protective bandages*effective