The exit status of the task that caused the workflow execution to fail was: ${workflow.exitStatus != null ? workflow.exitStatus : '-'}.
The full error message was:
${workflow.errorReport ?: 'n/a'}
| Launch time | ${workflow.start.format('dd-MMM-yyyy HH:mm:ss')} |
| Ending time | ${workflow.complete.format('dd-MMM-yyyy HH:mm:ss')} |
| duration | ${workflow.duration} |
| Launch directory | ${workflow.launchDir} |
| Work directory | ${workflow.workDir.toUriString()} |
| Project directory | ${workflow.projectDir} |
| Workflow name | ${workflow.scriptName ?: '-'} |
| Nextflow version | ${workflow.nextflow.version}, build ${workflow.nextflow.build} (${workflow.nextflow.timestamp}) |
The command used to launch the workflow was as follows:
${workflow.commandLine}