This is the readme for the models associated with the paper:

V. Takács, Z. Bardóczi, Á. Orosz, Á. Major, L. Tar, P. Berki, P. Papp, M. I. Mayer, H. Sebők, L. Zsolt, K. E. Sós, S. Káli, T. F. Freund, G. Nyiri (2024): SYNAPTIC AND DENDRITIC ARCHITECTURE OF TWO TYPES OF HIPPOCAMPAL SOMATOSTATIN INTERNEURONS

The Simplified_models folder contains the models having detailed morphology but simplified biophysics, cointaining only a passive "leak" conductance and a voltage-dependent Ih conductance.
	The modfiles subfolder contains the nmodl files that need to be compiled before the use of the models.
	The HOC subfolder contains the .hoc models separately for each morphology. Each hoc file contains a process called "syn_per_area_define()". This process (when called) defines the high conductance state (see paper), and requires two .dat files corresponding to the model that can be found in the "Syn_per_area_for_HCS" subfolder. One must either put these files in the same folder where the hocs are or set the path correctly. 
	The HOC_for_mito subfolder contains modified versions of the hoc files in the HOC subfolder. In these modified files the value of the parameter Ra is modified by a mupltiplier which is inversely proportional to the change in the dendritic diameter when taking into account that mitochondria take up space and therefore reduce the free space where currents can flow axially in the dendrites. 
	In the Parameters_from_neuroptimus subfolder you can find the csv files that contain 20 parameter sets for each morphology, which were the results of the parameter fitting process done by the Neuroptimus software. This is the data bases for the Supporting Figure 5 in the paper. 
	
The Detailed_models folder contains the models that have both detailed morphology and detailed biophysics, and therefore exhibit spiking behavior. The channel models and their distributions were based on Lawrence et al. 2006.
	The modfiles subfolder contains the nmodl files that need to be compiled before the use of the models. 
	The HOC subfolder contains the .hoc models separately for each morphology.
	In the Parameters_from_neuroptimus subfolder you can find the csv files that contain 10 parameter sets for each morphology, which were the results of the parameter fitting process done by the Neuroptimus software.

