a function to assign variants to edges based on maximum likihood

a function to assign variants to edges based on maximum likihood

# S4 method for mitoTracing
Add_AssignVariant(mitoTracing = DN1_HSC_mitoTracing.VerySensitive, n.cores = 4)

Arguments

mitoTracing

Need to have mitoTracing@Ctx.Mtx.depth (By Add_DepthMatrix), mitoTracing@Cts.Mtx mitoTracing@Cts.Mtx.bi, mitoTracing@TREE

Value

mitoTracing with @AssignedVarian list of two p is a probability matrix of variants vs edges (Rowsum is 1) and Variant.assign.report, a dataframe (Variant|Edge.Assign|prob)