rule sambamba_markdup:
    input:
        "test.sorted.bam"
    output:
        bam="test.md.bam",
        bai="test.md.bam.bai"
    log: "log.out",
    params:
        options="",
        tmp_directory="tmp/",
        remove_duplicates=False
    wrapper:
        "main/wrappers/sambamba_markdup"


