
  ___ ___ ___ _ _ _  
 |   |   |_  | | | | 
 | | | | | . | | | | 
 |__ |  _|___|_____|  23.9.2b1
 |___|_|             

User:   aes38@compute-75
Date:   Sun Oct 22 12:48:02 2023
Arch:   x86_64
Pid:    580896
CWD:    /users/home/aes38/Rydberg/new/water/SCAN/fifthext
Python: 3.9.6
gpaw:   /users/home/aes38/gpaw/gpaw (f5d5d6d24c)
_gpaw:  /users/home/aes38/gpaw/build/lib.linux-x86_64-3.9/
        _gpaw.cpython-39-x86_64-linux-gnu.so (f5d5d6d24c)
ase:    /hpcapps/source/ase_dev/ase (version 3.23.0b1-d4c62f2276)
numpy:  /hpcapps/libsci-gcc/software/Python/3.9.6-GCCcore-11.2.0/lib/python3.9/site-packages/numpy (version 1.22.4)
scipy:  /hpcapps/libsci-gcc/software/Python/3.9.6-GCCcore-11.2.0/lib/python3.9/site-packages/scipy (version 1.8.1)
libxc:  6.2.2
units:  Angstrom and eV
cores: 64
OpenMP: False
OMP_NUM_THREADS: 1

Reading from /users/home/aes38/Rydberg/new/water/pw/fifthext/mixed.gpw
Read dipole, energy, free_energy, magmom, magmoms
Reading input parameters:
  basis: dzp
  eigensolver: {blocksize: 1,
                converge_unocc: False,
                excited_state: True,
                functional: {'name': 'ks'},
                grad_tol_inner_loop: 0.0005,
                grad_tol_pz_localization: 0.0005,
                linesearch_algo: {'name': 'max-step', 'max_step': 0.2},
                localization_tol: None,
                localizationseed: None,
                localizationtype: None,
                max_step_inner_loop: 0.2,
                maxiter_inner_loop: 100,
                maxiter_pz_localization: 50,
                maxiter_unocc: 333,
                momevery: 10,
                name: etdm-fdpw,
                need_init_orbs: False,
                need_localization: False,
                printinnerloop: False,
                restart_canonical: True,
                restartevery_iloop_notconverged: 3,
                searchdir_algo: {'name': 'l-bfgs', 'memory': 3},
                use_prec: True}
  h: 0.15
  maxiter: 1000
  mixer: {backend: no-mixing}
  mode: {ecut: 600.0,
         name: pw}
  nbands: -10
  occupations: {name: mom,
                numbers: [[1. 1. 0. ... 0. 0. 0.]
 [1. 1. 1. ... 0. 0. 0.]],
                update_numbers: True,
                use_fixed_occupations: False,
                use_projections: True}
  spinpol: True
  symmetry: off
  xc: PBE

Initialize ...

species:
  O:
    name: Oxygen
    id: 32ecd46bf208036f09c70b0ec9a88b78
    Z: 8.0
    valence: 6
    core: 2
    charge: 0.0
    file: /users/home/share/gpaw-setups-0.9.20000/O.PBE.gz
    compensation charges: {type: gauss,
                           rc: 0.21,
                           lmax: 2}
    cutoffs: {filter: 1.17,
              core: 0.83}
    valence states:
      #              energy  rcut
      - 2s(2.00)   -23.961   0.688
      - 2p(4.00)    -9.029   0.598
      -  s           3.251   0.688
      -  p          18.182   0.598
      -  d           0.000   0.619
  
    # LCAO basis set for O:
    #   Name: dzp
    #   File: /users/home/share/gpaw-setups-0.9.20000/O.dzp.basis.gz
    #   Number of radial functions: 5
    #   Number of spherical harmonics: 13
    #     l=0, rc=4.3438 Bohr: 2s-sz confined orbital
    #     l=1, rc=5.3906 Bohr: 2p-sz confined orbital
    #     l=0, rc=2.2969 Bohr: 2s-dz split-valence wave
    #     l=1, rc=2.8906 Bohr: 2p-dz split-valence wave
    #     l=2, rc=5.3906 Bohr: d-type Gaussian polarization
    #   Number of RI-basis functions 0

  H:
    name: Hydrogen
    id: d65de229564ff8ea4db303e23b6d1ecf
    Z: 1.0
    valence: 1
    core: 0
    charge: 0.0
    file: /users/home/share/gpaw-setups-0.9.20000/H.PBE.gz
    compensation charges: {type: gauss,
                           rc: 0.15,
                           lmax: 2}
    cutoffs: {filter: 0.85,
              core: 0.53}
    valence states:
      #              energy  rcut
      - 1s(1.00)    -6.494   0.476
      -  s          20.717   0.476
      -  p           0.000   0.476
  
    # LCAO basis set for H:
    #   Name: dzp
    #   File: /users/home/share/gpaw-setups-0.9.20000/H.dzp.basis.gz
    #   Number of radial functions: 3
    #   Number of spherical harmonics: 5
    #     l=0, rc=6.4219 Bohr: 1s-sz confined orbital
    #     l=0, rc=3.6094 Bohr: 1s-dz split-valence wave
    #     l=1, rc=6.4219 Bohr: p-type Gaussian polarization
    #   Number of RI-basis functions 0

Reference energy: -2065.832626  # eV

Spin-polarized calculation.
Magnetic moment: 0.000000

Convergence criteria:
 Maximum [total energy] change in last 3 cyles: 0.0005 eV / valence electron
 Maximum integral of absolute [dens]ity change: 0.0001 electrons / valence electron
 Maximum integral of absolute [eigenst]ate change: 4e-08 eV^2 / valence electron
 Maximum number of scf [iter]ations: 1000
 (Square brackets indicate name in SCF output, whereas a 'c' in
 the SCF output indicates the quantity has converged.)

Symmetries present (total): 1

  ( 1  0  0)
  ( 0  1  0)
  ( 0  0  1)

1 k-point (Gamma)
1 k-point in the irreducible part of the Brillouin zone
       k-points in crystal coordinates                weights
   0:     0.00000000    0.00000000    0.00000000          1/1

Wave functions: Plane wave expansion
  Cutoff energy: 600.000 eV
  Number of coefficients: 295641 (reduced to 147821)
  Pulay-stress correction: 0.000000 eV/Ang^3 (de/decut=0.000000)
  Using Numpy's FFT
  ScaLapack parameters: grid=1x1, blocksize=None
  Wavefunction extrapolation:
    Improved wavefunction reuse through dual PAW basis 

Excited-state calculation with Maximum Overlap Method
  Gaussian smearing of holes and excited electrons: off

Eigensolver
   Direct minimisation using exponential transformation.
       Search direction: L-BFGS algorithm
       Line search: step size equals one
       Preconditioning: True
       Orbital-density self-interaction corrections: ks
       WARNING: do not use it for metals as occupation numbers are
                not found variationally
 

Densities:
  Coarse grid: 135*144*140 grid
  Fine grid: 270*288*280 grid
  Total Charge: 0.000000 

Density mixing:
  Method: difference
  Backend: no-mixing
  Linear mixing parameter: 0
  old densities: 0
  Damping of long wavelength oscillations: 0 

Hamiltonian:
  XC and Coulomb potentials evaluated on a 270*288*280 grid
  Using the PBE Exchange-Correlation functional
  External potential:
    NoExternalPotential
 

XC parameters: PBE with 2 nearest neighbor stencil

Memory estimate:
  Process memory now: 1201.73 MiB
  Calculator: 84.67 MiB
    Density: 21.51 MiB
      Arrays: 11.44 MiB
      Localized functions: 10.07 MiB
      Mixer: 0.00 MiB
    Hamiltonian: 8.74 MiB
      Arrays: 8.50 MiB
      XC: 0.00 MiB
      Poisson: 0.00 MiB
      vbar: 0.25 MiB
    Wavefunctions: 54.41 MiB
      Arrays psit_nG: 0.99 MiB
      Eigensolver: 0.18 MiB
      Projections: 0.00 MiB
      Projectors: 0.30 MiB
      PW-descriptor: 52.95 MiB

Total number of cores used: 64
Domain decomposition: 4 x 4 x 4

Number of atoms: 3
Number of atomic orbitals: 23
Number of bands in calculation: 14
Number of valence electrons: 8
Bands to converge: occupied

... initialized

Input parameters:
  convergence: {eigenstates: 1e-06}
  xc: XC_MGGA_X_R2SCAN+XC_MGGA_C_R2SCAN

Initialize ...

species:
  O:
    name: Oxygen
    id: 32ecd46bf208036f09c70b0ec9a88b78
    Z: 8.0
    valence: 6
    core: 2
    charge: 0.0
    file: /users/home/share/gpaw-setups-0.9.20000/O.PBE.gz
    compensation charges: {type: gauss,
                           rc: 0.21,
                           lmax: 2}
    cutoffs: {filter: 1.17,
              core: 0.83}
    valence states:
      #              energy  rcut
      - 2s(2.00)   -23.961   0.688
      - 2p(4.00)    -9.029   0.598
      -  s           3.251   0.688
      -  p          18.182   0.598
      -  d           0.000   0.619
  
    # LCAO basis set for O:
    #   Name: dzp
    #   File: /users/home/share/gpaw-setups-0.9.20000/O.dzp.basis.gz
    #   Number of radial functions: 5
    #   Number of spherical harmonics: 13
    #     l=0, rc=4.3438 Bohr: 2s-sz confined orbital
    #     l=1, rc=5.3906 Bohr: 2p-sz confined orbital
    #     l=0, rc=2.2969 Bohr: 2s-dz split-valence wave
    #     l=1, rc=2.8906 Bohr: 2p-dz split-valence wave
    #     l=2, rc=5.3906 Bohr: d-type Gaussian polarization
    #   Number of RI-basis functions 0

  H:
    name: Hydrogen
    id: d65de229564ff8ea4db303e23b6d1ecf
    Z: 1.0
    valence: 1
    core: 0
    charge: 0.0
    file: /users/home/share/gpaw-setups-0.9.20000/H.PBE.gz
    compensation charges: {type: gauss,
                           rc: 0.15,
                           lmax: 2}
    cutoffs: {filter: 0.85,
              core: 0.53}
    valence states:
      #              energy  rcut
      - 1s(1.00)    -6.494   0.476
      -  s          20.717   0.476
      -  p           0.000   0.476
  
    # LCAO basis set for H:
    #   Name: dzp
    #   File: /users/home/share/gpaw-setups-0.9.20000/H.dzp.basis.gz
    #   Number of radial functions: 3
    #   Number of spherical harmonics: 5
    #     l=0, rc=6.4219 Bohr: 1s-sz confined orbital
    #     l=0, rc=3.6094 Bohr: 1s-dz split-valence wave
    #     l=1, rc=6.4219 Bohr: p-type Gaussian polarization
    #   Number of RI-basis functions 0

Reference energy: -2065.832626  # eV

Spin-polarized calculation.
Magnetic moment: 0.000000

Convergence criteria:
 Maximum [total energy] change in last 3 cyles: 0.0005 eV / valence electron
 Maximum integral of absolute [dens]ity change: 0.0001 electrons / valence electron
 Maximum integral of absolute [eigenst]ate change: 1e-06 eV^2 / valence electron
 Maximum number of scf [iter]ations: 1000
 (Square brackets indicate name in SCF output, whereas a 'c' in
 the SCF output indicates the quantity has converged.)

Excited-state calculation with Maximum Overlap Method
  Gaussian smearing of holes and excited electrons: off

Eigensolver
   Direct minimisation using exponential transformation.
       Search direction: L-BFGS algorithm
       Line search: step size equals one
       Preconditioning: True
       Orbital-density self-interaction corrections: ks
       WARNING: do not use it for metals as occupation numbers are
                not found variationally
 

Density mixing:
  Method: difference
  Backend: no-mixing
  Linear mixing parameter: 0
  old densities: 0
  Damping of long wavelength oscillations: 0 

Hamiltonian:
  XC and Coulomb potentials evaluated on a 270*288*280 grid
  Using the XC_MGGA_X_R2SCAN+XC_MGGA_C_R2SCAN Exchange-Correlation functional
  External potential:
    NoExternalPotential
 

XC parameters: XC_MGGA_X_R2SCAN+XC_MGGA_C_R2SCAN with 2 nearest neighbor stencil

Memory estimate:
  Process memory now: 1201.73 MiB
  Calculator: 85.65 MiB
    Density: 21.51 MiB
      Arrays: 11.44 MiB
      Localized functions: 10.07 MiB
      Mixer: 0.00 MiB
    Hamiltonian: 9.72 MiB
      Arrays: 8.50 MiB
      XC: 0.98 MiB
      Poisson: 0.00 MiB
      vbar: 0.25 MiB
    Wavefunctions: 54.41 MiB
      Arrays psit_nG: 0.99 MiB
      Eigensolver: 0.18 MiB
      Projections: 0.00 MiB
      Projectors: 0.30 MiB
      PW-descriptor: 52.95 MiB

Total number of cores used: 64
Domain decomposition: 4 x 4 x 4

Number of atoms: 3
Number of atomic orbitals: 23
Number of bands in calculation: 14
Number of valence electrons: 8
Bands to converge: occupied

... initialized

Initializing position-dependent things.

Density initialized from wave functions
              .------------------------------------------------.  
             /|                                                |  
            / |                                                |  
           /  |                                                |  
          /   |                                                |  
         /    |                                                |  
        /     |                                                |  
       /      |                                                |  
      /       |                                                |  
     /        |                                                |  
    /         |                                                |  
   /          |                                                |  
  /           |                                                |  
 *            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            |                 O                              |  
 |            |                 H                              |  
 |            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            |                                                |  
 |            .------------------------------------------------.  
 |           /                                                /   
 |          /                                                /    
 |         /                                                /     
 |        /                                                /      
 |       /                                                /       
 |      /                                                /        
 |     /                                                /         
 |    /                                                /          
 |   /                                                /           
 |  /                                                /            
 | /                                                /             
 |/                                                /              
 *------------------------------------------------*               

Positions:
   0 O     10.000000   10.757136   10.586132    ( 0.0000,  0.0000,  0.0000)
   1 H     10.000000   11.514273   10.000000    ( 0.0000,  0.0000,  0.0000)
   2 H     10.000000   10.000000   10.000000    ( 0.0000,  0.0000,  0.0000)

Unit cell:
           periodic     x           y           z      points  spacing
  1. axis:    no    20.000000    0.000000    0.000000   135     0.1481
  2. axis:    no     0.000000   21.514273    0.000000   144     0.1494
  3. axis:    no     0.000000    0.000000   20.586132   140     0.1470

  Lengths:  20.000000  21.514273  20.586132
  Angles:   90.000000  90.000000  90.000000

Effective grid spacing dv^(1/3) = 0.1482

     iter     time        total  log10-change:  magmom         iter
                         energy  eigst   dens             inner loop
iter:   1 12:49:42    -5.965786  -1.10  -4.19c   +0.0000           3
iter:   2 12:50:13    -5.970820  -2.09  -4.39c   +0.0000           3
iter:   3 12:50:44    -5.971569  -2.41  -4.79c   +0.0000           3
iter:   4 12:51:04    -5.971839c -2.88  -4.56c   +0.0000           2
iter:   5 12:51:25    -5.971911c -3.42  -4.77c   +0.0000           2
iter:   6 12:51:46    -5.971936c -3.67  -4.89c   +0.0000           2
iter:   7 12:52:06    -5.971942c -3.79  -4.84c   +0.0000           2
iter:   8 12:52:17    -5.971950c -4.43  -4.27c   +0.0000           1
iter:   9 12:52:27    -5.971952c -5.02  -4.65c   +0.0000           1
iter:  10 12:52:38    -5.971952c -5.42  -4.95c   +0.0000           1
iter:  11 12:52:48    -5.971953c -5.38  -4.79c   +0.0000           1
iter:  12 12:52:58    -5.971953c -5.59  -5.00c   +0.0000           1
iter:  13 12:53:19    -5.971953c -6.04c -5.53c   +0.0000           2

Occupied states converged after 29 e/g evaluations
Unoccupied states are not converged.

Converged after 13 iterations.

Dipole moment: (0.000000, -0.000001, 0.320278) |e|*Ang

Total magnetic moment: (0.000000, 0.000000, 0.000000)
Local magnetic moments:
   0 O  ( 0.000000,  0.000000, -0.556365)
   1 H  ( 0.000000,  0.000000, -0.018572)
   2 H  ( 0.000000,  0.000000, -0.018572)

Energy contributions relative to reference atoms: (reference = -2065.832626)

Kinetic:        +14.253089
Potential:      -10.946525
External:        +0.000000
XC:              -9.399151
Entropy (-ST):   +0.000000
Local:           +0.120635
SIC:             +0.000000
--------------------------
Free energy:     -5.971953
Extrapolated:    -5.971953

Spin contamination: 0.887685 electrons
                   Up                     Down
 Band  Eigenvalues  Occupancy  Eigenvalues  Occupancy
    0    -30.81312    1.00000    -32.48602    1.00000
    1    -18.02124    1.00000    -18.50113    1.00000
    2    -12.50677    0.00000    -17.58912    1.00000
    3    -12.36340    1.00000    -13.03217    1.00000
    4     -2.96320    1.00000     -1.39122    0.00000
    5     -0.40947    0.00000     -0.23459    0.00000
    6      0.03736    0.00000     -0.00739    0.00000
    7      0.27701    0.00000      0.13626    0.00000
    8      0.29679    0.00000      0.15107    0.00000
    9      0.35688    0.00000      0.31704    0.00000
   10      0.37993    0.00000      0.34971    0.00000
   11      0.38957    0.00000      0.40032    0.00000
   12      0.48192    0.00000      0.41039    0.00000
   13      0.71998    0.00000      0.60196    0.00000

Fermi level: inf

Writing to mixed.gpw (mode='all')

Timing:                                      incl.     excl.
-------------------------------------------------------------------
Density initialized from wave functions:     2.031     2.031   0.6% |
 Symmetrize density:                         0.000     0.000   0.0% |
Hamiltonian:                                 6.678     0.108   0.0% |
 Atomic:                                     0.000     0.000   0.0% |
  XC Correction:                             0.000     0.000   0.0% |
 Calculate atomic Hamiltonians:              0.031     0.031   0.0% |
 Communicate:                                0.165     0.165   0.1% |
 Initialize Hamiltonian:                     0.001     0.001   0.0% |
 Poisson:                                    0.003     0.003   0.0% |
 XC 3D grid:                                 6.370     6.370   1.9% ||
PWDescriptor:                                0.397     0.397   0.1% |
Redistribute:                                0.001     0.001   0.0% |
SCF-cycle:                                 311.049     0.031   0.0% |
 Apply H:                                    1.426     1.426   0.4% |
  HMM T:                                     0.000     0.000   0.0% |
 Density:                                    2.301     0.000   0.0% |
  Atomic density matrices:                   0.000     0.000   0.0% |
  Mix:                                       2.005     2.005   0.6% |
  Multipole moments:                         0.000     0.000   0.0% |
  Pseudo density:                            0.295     0.295   0.1% |
   Symmetrize density:                       0.000     0.000   0.0% |
 Direct Minimisation step:                 300.636     0.102   0.0% |
  Get Search Direction:                      0.285     0.285   0.1% |
  Inner loop:                              300.205     0.155   0.0% |
   Energy and gradients:                    42.427     0.010   0.0% |
    Unitary gradients:                       0.031     0.031   0.0% |
    e/g grid calculations:                  42.386     0.074   0.0% |
     Apply H:                               42.311    42.300  12.9% |----|
      HMM T:                                 0.011     0.011   0.0% |
   Unitary matrix:                           0.014     0.014   0.0% |
   Update Kohn-Sham energy:                257.609     0.027   0.0% |
    Density:                                65.269     0.001   0.0% |
     Atomic density matrices:                0.017     0.017   0.0% |
     Mix:                                   56.768    56.768  17.3% |------|
     Multipole moments:                      0.003     0.003   0.0% |
     Pseudo density:                         8.481     8.480   2.6% ||
      Symmetrize density:                    0.000     0.000   0.0% |
    Hamiltonian:                           192.313     3.277   1.0% |
     Atomic:                                 0.026     0.026   0.0% |
      XC Correction:                         0.000     0.000   0.0% |
     Calculate atomic Hamiltonians:          0.887     0.887   0.3% |
     Communicate:                            1.732     1.732   0.5% |
     New Kinetic Energy:                     0.014     0.014   0.0% |
     Poisson:                                0.093     0.093   0.0% |
     XC 3D grid:                           186.284   186.284  56.8% |----------------------|
  Orthonormalize:                            0.044     0.003   0.0% |
   calc_s_matrix:                            0.007     0.007   0.0% |
   inverse-cholesky:                         0.005     0.005   0.0% |
   projections:                              0.023     0.023   0.0% |
   rotate_psi_s:                             0.006     0.006   0.0% |
 Hamiltonian:                                6.649     0.114   0.0% |
  Atomic:                                    0.000     0.000   0.0% |
   XC Correction:                            0.000     0.000   0.0% |
  Calculate atomic Hamiltonians:             0.032     0.032   0.0% |
  Communicate:                               0.060     0.060   0.0% |
  New Kinetic Energy:                        0.000     0.000   0.0% |
  Poisson:                                   0.003     0.003   0.0% |
  XC 3D grid:                                6.440     6.440   2.0% ||
 Orthonormalize:                             0.006     0.000   0.0% |
  Orthonormalize:                            0.006     0.000   0.0% |
   calc_s_matrix:                            0.001     0.001   0.0% |
   inverse-cholesky:                         0.002     0.002   0.0% |
   projections:                              0.001     0.001   0.0% |
   rotate_psi_s:                             0.000     0.000   0.0% |
 projections:                                0.001     0.001   0.0% |
Set symmetry:                                0.000     0.000   0.0% |
Other:                                       8.019     8.019   2.4% ||
-------------------------------------------------------------------
Total:                                               328.174 100.0%

Memory usage: 1.63 GiB
Date: Sun Oct 22 12:53:30 2023
