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Published August 28, 2021 | Version v0.1
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A base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding

  • 1. McGill University

Description

TF binding models built by JAMS (https://github.com/csglab/JAMS), ChIP-seq peak files (from ENCODE, Najafabadi et al. 2015, Schmitges et al. 2016, and Imbeault et al. 2017; called by MACS 1.4v), and ChIP-seq pulldown and control tags from said peaks.  

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Additional details

References

  • Hernandez-Corchado, A., & Najafabadi, H. S. (2021). A base-resolution panorama of the in vivo impact of cytosine methylation on transcription factor binding. BioRxiv. https://doi.org/10.1101/2021.08.27.457995