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Published August 1, 2014 | Version v1
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Revision of the systematics of the cardinalfishes (Percomorpha: Apogonidae) based on molecular analyses and comparative reevaluation of morphological characters

Creators

  • 1. Atmosphere and Ocean Research Institute, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8564, Japan.
  • 2. Florida Museum of Natural History, University of Florida, Dickinson Hall, Museum Road, Gainesville, Florida, 32611, United States Mote Marine Laboratory, 1600 Ken Thompson Parkway, Sarasota, Florida 34236, United States. E-mail: cardinalfish@comcast.net University of the Ryukyus, 1 Senbaru, Nishihara-cho, Okinawa 903-0213, Japan

Description

Mabuchi, Kohji, Fraser, Thomas H., Song, Hayeun, Azuma, Yoichiro, Nishida, Mutsumi (2014): Revision of the systematics of the cardinalfishes (Percomorpha: Apogonidae) based on molecular analyses and comparative reevaluation of morphological characters. Zootaxa 3846 (2): 151-203, DOI: 10.11646/zootaxa.3846.2.1

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URL
https://www.checklistbank.org/dataset/5333
LSID
urn:lsid:zoobank.org:pub:3844E8F1-A20C-44B4-9B47-B170F5A7C0C2
LSID
urn:lsid:plazi.org:pub:3606360581180B13FFEFC668FFB5D67B
URL
http://publication.plazi.org/id/3606360581180B13FFEFC668FFB5D67B

Cites
Publication: 10.3853/j.0067-1975.30.1976.396 (DOI)
Publication: 10.2307/1447980 (DOI)
Publication: 10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288 (DOI)
Publication: 10.1111/j.1469-7998.1887.tb08159.x (DOI)
Publication: 10.1111/j.1420-9101.2011.02391.x (DOI)
Publication: 10.3354/meps161295 (DOI)
Publication: 10.1643/ci-12-060 (DOI)
Publication: 10.11646/zootaxa.3714.1.1 (DOI)
Publication: 10.2307/1446398 (DOI)
Publication: 10.1080/00359199609520605 (DOI)
Publication: 10.2307/1436776 (DOI)
Publication: 10.5962/bhl.title.46678 (DOI)
Publication: 10.1016/j.ympev.2008.10.014 (DOI)
Publication: 10.1186/1471-2148-7-44 (DOI)
Publication: 10.1002/iroh.3510610418 (DOI)
Publication: 10.1643/cg-03-087r1 (DOI)
Publication: 10.1093/bioinformatics/btg193 (DOI)
Publication: 10.1016/j.ympev.2005.05.003 (DOI)
Publication: 10.1002/evan.1360030112 (DOI)
Publication: 10.3853/j.0067-1975.13.1921.863 (DOI)
Publication: 10.1006/mpev.2000.0839 (DOI)
Publication: 10.1073/pnas.1304661110 (DOI)
Publication: 10.1134/s0032945206040011 (DOI)
Publication: 10.1080/03745480509443634 (DOI)
Publication: 10.1080/03745484209442950 (DOI)
Publication: 10.1093/bioinformatics/btg180 (DOI)
Publication: 10.1093/bioinformatics/17.12.1246 (DOI)
Publication: 10.1080/00222935408651790 (DOI)
Publication: 10.1080/00222935508655685 (DOI)
Publication: 10.1080/00222936308651406 (DOI)
Publication: 10.1093/bioinformatics/btl446 (DOI)
Publication: 10.1111/j.1755-0998.2011.03021.x (DOI)
Publication: 10.1016/j.ympev.2009.05.017 (DOI)
Publication: 10.1002/9781119950387 (DOI)
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Figure: 10.5281/zenodo.4928551 (DOI)
Figure: 10.5281/zenodo.4928553 (DOI)
Figure: 10.5281/zenodo.4928559 (DOI)
Figure: 10.5281/zenodo.4928561 (DOI)
Figure: 10.5281/zenodo.4928563 (DOI)
Figure: 10.5281/zenodo.4928565 (DOI)
Figure: 10.5281/zenodo.4928567 (DOI)
Is source of
Dataset: https://www.gbif.org/dataset/abc923a1-d566-4f2d-ae33-8488ab51424f (URL)

References

  • Akaike, H. (1974) A new look at the statistical model identification. IEEE Transactions on Automatic Control, 19 (6), 716-723. http://dx.doi.org/10.1109%2ftac.1974.1100705
  • Allen, G.R. (1992) A new species of cardinalfish (Apogonidae) from northern Australia. Records of the Western Australian Museum, 15 (4), 697-701. http://dx.doi.org/10.3853/j.0067-1975.30.1976.396
  • Allen, G.R. & Erdmann, M.V. (2012) Reef fishes of the East Indies. Apogonidae 366-418, Volumes I-III. Tropical Reef Research, Perth, Australia, i-xiv + 1292 pp.
  • Allen, G.R. & Kuiter, R.H. (1994) Descriptions of two news species of cardinalfishes (Apogonidae) from Malaysia and Indonesia. Revue francaise d'Aquariologie Herpetologie, 21 (1-2), 19-23.
  • Baldwin, C.C. & Johnson, G.D. (1999) Paxton concilians: a new genus and species of Pseudamine apogonid (Teleostei: Percoidei) from northwestern Australia: the sister group of the enigmatic Gymnapogon. Copeia, 1999 (4), 1050-1073. http://dx.doi.org/10.2307/1447980
  • Bergman, L.M.R. (2004) The cephalic lateralis system of cardinalfishes (Perciformes: Apogonidae) and its application to the taxonomy and systematics of the family. Dissertation, University of Hawaii, Honolulu, Hawaii, 373 pp.
  • Betancur-R., R., Broughton, R.E., Wiley, E.O., Carpenter, K., Andres Lopez, J., Li, C.H., Holcroft, N.I., Arcila, D., Sanciangco, M., Cureton II, J.C., Zhang, F.F, Buser, T., Campbell, M.A., Ballesteros, J.A., Roa-Varon, A., Willis, S., Calvin Borden, W., Rowley, T., Reneau1, P.C., Hough, D.J., Lu, G.Q., Grande, T., Arratia, G. & Orti1, G. (2013) The tree of life and a new classification of bony fishes. PLOS Currents: Tree of Life, Edition 1, 1-45. [2013 Apr. 18] http://dx.doi.org/10.1371/currents.tol.53ba26640df0ccaee75bb165c8c26288
  • Bleeker, P. (1854a) Bijdrage tot de kennis der ichthyologische fauna van het eiland Floris. Natuurkundig Tijdschrift voor Nederlandsch Indie, 6, 311-338.
  • Bleeker, P. (1854b) Vijfde bijdrage tot de kennis der ichthyologische fauna van Amboina. Natuurkundig Tijdschrift voor Nederlandsch Indie, 6, 455-508.
  • Bleeker, P. (1855) Bijdrage tot de kennis der ichthyologische fauna van Batjan. Natuurkundig Tijdchrift voor Nederlandsch Indie, 7, 359-378.
  • Bleeker, P. (1856a) Zevende bijdrage tot de kennis der ichthyologische fauna van Ternate. Natuurkundig Tijdchrift voor Nederlandsch Indie, 10, 357-386.
  • Bleeker, P. (1856b) Beschrijvingen van nieuwe of weinig bekende vischsoorten van Manado en Makassar, grootendeels verzameld op eene reis naar den Molukschen Archipel in het gevolg van den Gouverneur Generaal Duymaer van Twist. Acta Societatis Regiae Scientiarum Indo-Neerlandicae, 1, 1-80.
  • Bleeker, P. (1856c) Bijdrage tot de kennis der ichthyologische fauna van het eiland Boeroe. Natuurkundig Tijdchrift voor Nederlandsch Indie, 11, 383-414.
  • Bleeker, P. (1859) Enumeratio specierum piscium hucusque in Archipelago indico observatarum, adjectis habitationibus citationibusque, ubi descriptiones earum recentiores reperiuntur, nec non speciebus Musei Bleekeriani Bengalensibus, Japonicis, Capensibus Tasmanicisque. Acta Societatis Regiae Scientiarum Indo-Neerlandicae, 6, i-xxxvi + 1-276.
  • Bleeker, P. (1863) Onzieme notice sur la fauna ichthyologique de l'ile de Ternate. Nederlandsch Tijdschrift voor de Dierkunde, 1, 22-238.
  • Bleeker, P. (1865) Enumeration des especes de poissons actuellement connues de l'ile d'Amboine. Nederlandsch Tijdschrift voor de Dierkunde, 2, 270-276, 273-293.
  • Bleeker, P. (1874) Revision des especes indo-archipelagiques du groupe des Apogonini. Natuurkundige Verhandelingen van de Hollandsche Maatschappij der Wetenschappen te Haarlem, 3, 1-82.
  • Boulenger, G.A. (1888) An account of the fishes obtained by Surgeon-Major A. S. G. Jayakar at Muscat, east coast of Arabia. Proceedings of the Zoological Society of Londo n, 1887 (4), 653-667. http://dx.doi.org/10.1111/j.1469-7998.1887.tb08159.x
  • Cantor, T.E. (1849) Catalogue of Malayan fishes. Journal of the Asiatic Society of Bengal, 18 (2), i-xii + 983-1443.
  • Castelnau, F.L. (1878) Australian fishes. New or little known species. Proceedings of the Linnean Society of New South Wales, 2 (3), 225-248.
  • Cowman, P.F. & Bellwood, D.R. (2011) Coral reefs as drivers of cladogenesis: expanding coral reefs, cryptic extinction events, and the development of biodiversity hotspots. Journal of Evolutionary Biology, 24, 2543-2562. http://dx.doi.org/10.1111/j.1420-9101.2011.02391.x
  • Cuvier, G. & Valenciennes, A. (1829) Histoire naturelle des poissons. Tome troisieme. Suite du Livre troisieme. Des perco?des a dorsale unique a sept rayons branchiaux et a dents en velours ou en cardes. F.G. Levrault, Paris, 3, i-xxviii + 2 + 1-500.
  • Eschmeyer, W.N. (2014) Genera, Species, References. Electronic version http://research.calacademy.org/research/ichthyology/ catalog/fishcatmain.asp (accessed 10 March 2014).
  • Eschmeyer, W.N. & Fong, J.D. (2014) Species by family/subfamily. On-line 5 August 2013. http://research.calacademy.org/ redirect?url=http://researcharchive.calacademy.org/research/Ichthyology/catalog/SpeciesByFamily.asp (accessed 10 Mar. 2014)
  • Fishelson, L., Goren, M. & Gon, O. (1997) Black gut phenomenon in cardinal fishes (Apogonidae, Teleostei). Marine Ecology Progress Series, 161, 295-298. http://dx.doi.org/10.3354/meps161295
  • Fowler, H.W. (1907) Some new and little-known percoid fishes. Proceedings of the Academy of Natural Sciences of Philadelphia (for 1906), 58, 510-528.
  • Fowler, H.W. (1938) The fishes of the George Vanderbilt South Pacific Expedition, 1937. Monographs of the Academy of Natural Sciences of Philadelphia, 2, i-v + 1-349.
  • Fowler, H.W. (1944) Fishes obtained in the New Hebrides by Dr. Edward L. Jackson. Proceedings of the Academy of Natural Sciences of Philadelphia, 96, 155-199.
  • Fowler, H.W. & Bean, B.A. (1930) Contributions to the biology of the Philippine Archipelago and adjacent regions. The fishes of the families Amiidae, Chandidae, Duleidae, and Serranidae, obtained by the United States Bureau of Fisheries steamer "Albatross" in 1907 to 1910, chiefly in the Philippine Islands and adjacent seas. Bulletin of the United States National Museum, 100, i-ix + 1-334.
  • Fraser, T.H. (1972) Comparative osteology of the shallow water cardinal fishes (Perciformes: Apogonidae) with references to the systematics and evolution of the family. Ichthyological Bulletin of the J. L. B. Smith Institute of Ichthyology, 34, i-v + 1-105.
  • Fraser, T.H. (1973) Evolutionary significance of Holapogon, a new genus of cardinal fishes (Apogonidae), with a redescription of its type-species, Apogon maximus. The J.L.B Smith Institute of Ichthyology Special Publication, 10, 1-7.
  • Fraser, T.H. (2008) Cardinalfishes of the genus Nectamia (Apogonidae, Perciformes) from the Indo-Pacific region with descriptions of four new species. Zootaxa, 1691, 1-52.
  • Fraser, T.H. (2013a) Family status of Amioides and the senior synonym of Coranthus (Percomorpha: Apogonidae). Copeia, 2013, 23-30. http://dx.doi.org/10.1643/ci-12-060
  • Fraser, T.H. (2013b) A new genus of cardinalfish (Apogonidae: Percomorpha), redescription of Archamia and resemblances and relationships with Kurtus (Kurtidae: Percomorpha). Zootaxa, 3714 (1), 1-63. http://dx.doi.org/10.11646/zootaxa.3714.1.1
  • Fraser, T.H. & Allen, G.R. (2010) Cardinalfishes of the genus Apogonichthyoides Smith, 1949 (Apogonidae) with a description of a new species from the West-Pacific region. Zootaxa, 2348, 40-56.
  • Fraser, T.H. & Lachner, E.A. (1985) A revision of the cardinalfish subgenera Pristiapogon and Zoramia (genus Apogon) of the Indo-Pacific region (Teleostei: Apogonidae). Smithsonian Contributions to Zoology, 412, 1-46.
  • Fraser, T.H. & Struhsaker, P.J. (1991) A new genus and species of cardinalfish (Apogonidae) from the Indo-West Pacific, with a key to Apogonine genera. Copeia, 1991 (3), 718-722. http://dx.doi.org/10.2307/1446398
  • Fraser, T.H. & Robins, C.R. (1970) The R/V Pillsbury deep-sea biological expedition to the Gulf of Guinea, 1964-65. A new Atlantic genus of cardinalfishes with comments on some species from the Gulf of Guinea. Studies in Tropical Oceanography, 4 (2), 302-315.
  • Fricke, R. & Eschmeyer, W.N. (2014) A guide to fish collections in the Catalog of Fishes. http://research.calacademy.org/ research/ichthyology/catalog/collections.asp (accessed 10 March 2014)
  • Gill, T.N. (1862) Remarks on the Relations of the Genera and Other Groups of Cuban Fishes. Proceedings of the Academy of Natural Sciences of Philadelphia, 14, 235-242
  • Gill, T.N. (1863) Catalogue of the fishes of Lower California, in the Smithsonian Institution, collected by Mr. J. Xantus. Part IV. Proceedings of the Academy of Natural Sciences of Philadelphia, 15, 80-88.
  • Gill, T.N. (1893) Families and subfamilies of fishes. Memoirs of the National Academy of Science, VI, 127-138.
  • Gon, O. (1987) Redescription of Apogon (Ostorhinchus) fleurieu (Lacepede, 1802) with notes on its synonymy. Japanese Journal of Ichthyology, 34, 138-145.
  • Gon, O. (1993) Revision of the cardinalfish genus Cheilodipterus (Perciformes: Apogonidae), with description of five new species. Indo-Pacific Fishes, 22, 1-59,
  • Gon, O. (1995) Revision of the cardinalfish subgenus Lepidamia (Perciformes, Apogonidae, Apogon). Israel Journal of Zoology, 41, 1-22. http://dx.doi.org/10.1080/00359199609520605
  • Gon, O. (1996) Revision of the cardinalfish subgenus Jaydia (Perciformes, Apogonidae, Apogon). Transactions of the Royal Society of South Africa, 51, 147-194. http://dx.doi.org/10.1080/00359199609520605
  • Gon, O. & Allen, G.R. (2012) Revision of the Indo-Pacific cardinalfish genus Siphamia (Perciformes: Apogonidae). Zootaxa, 3294, 1-84.
  • Gon, O. & Randall, J.E. (2003) Revision of the Indo-Pacific cardinalfish genus Archamia (Perciformes: Apogonidae, with descriptions of a new species. Indo-Pacific Fishes, 35, 1-49.
  • Gray, J.E. (1854) Catalogue of fish collected and described by Laurence Theodore Gronow, now in the British Museum. London, i-vii + 1-196.
  • Greenfield, D.W., Langston, R.C. & Randall, J.E. (2005) Two new cardinalfish species of the Indo-Pacific fish genus Zoramia. Proceedings of the California Academy of Science s, Fourth Series, 56, 625-637.
  • Gunther, A. (1859) Catalogue of the acanthopterygian fishes in the collection of the British Museum. Gasterosteidae, Berycidae, Percidae, Aphredoderidae, Pristipomatidae, Mullidae, Sparidae. London, 1, i-xxxi + 1-524.
  • Hayashi, M. (1991) Redescription of Cercamia eremia, (Perciformes: Apogonidae) from Japan, with comments of the osteological characters. Science Report of Yokosuka City Museum, 39, 35-44.
  • Ida, H. & Moyer, J.T. (1974) Apogonid fishes of Miyake-jima and Ishigaki-jima, Japan, with descriptions of a new species. Japanese Journal of Ichthyology, 21 (3), 113-128.
  • Jordan, D.S. (1917) Notes on Glossamia and related genera of cardinal fishes. Copeia, 44, 46-47. http://dx.doi.org/10.2307/1436776
  • Jordan, D.S. & Evermann, B.W. (1903) Descriptions of new genera and species of fishes from the Hawaiian Islands. Bulletin of the U.S. Fish Commission, 22 (1902), 161-208.
  • Jordan, D.S. & Evermann, B.W. (1905) The aquatic resources of the Hawaiian Islands. Part I. The shore fishes of the Hawaiian Islands with a general account of the fish fauna. Bulletin of the U.S. Fish Commission, 23 (1), i-xxviii + 1-574.
  • Jordan, D.S. & Jordan, E.K. (1922) A list of the fishes of Hawaii, with notes and descriptions of new species. Memoires of the Carnegie Museum, 10 (1), 1-92, Pls. 1-4. http://dx.doi.org/10.5962/bhl.title.46678
  • Jordan, D.S. & Seale, A. (1905) List of fishes collected by Dr. Bashford Dean on the island of Negros, Philippines. Proceedings of the United States National Museum, 28 (1407), 769-803.
  • Kawahara, R., Miya, M., Mabuchi, K., Near, T.J. & Nishida, M. (2009) Stickleback phylogenies resolved: Evidence from mitochondrial genomes and 11 nuclear genes. Molecular Phylogenetics and Evolution, 50, 401-404. http://dx.doi.org/10.1016/j.ympev.2008.10.014
  • Klunzinger, C.B. (1870) Synopsis der Fische des Rothen Meeres. I. Theil. Percoiden-Mugiloiden. Verhandlungen der K.-K. zoologisch-botanischen Gesellschaft in Wien, 20, 669-834.
  • Koumans, F.P. (1933) On a new genus and species of Apogonidae. Zoologische Mededelingen, 16 (1-2), 78.
  • Kuiter, R.H. & Kozawa, T. (1999) Apogonidae Pictorial Guide Fishes of the Indo-West Pacific. 2nd Edition, CDROM, Aquatic Photographics, Seaford, Australia, 130 pp.
  • Li, C.H., Orti, G., Zhang, G. & Lu, G.Q. (2007) A practical approach to phylogenomics: the phylogeny of ray-finned fish (Actinopterygii) as a case study. BMC Evolutionary Biology, 7, 44. http://dx.doi.org/10.1186/1471-2148-7-44
  • Lacepede, B.G.E. (1801) Histoire naturelle des poissons. Paris, 3, i-lxvi + 1-558.
  • Lacepede, B.G.E. (1802) Histoire naturelle des poissons. Paris, 4, i-xliv + 1-728.
  • Lindberg, G.U. (1971) Families of the fishes of the world: a check list and a key. Nauka, Leningrad. 1-472. [In Russian, English translation 1973, Fishes of the world: a key to families and a checklist. Israel Program for Scientific Translations, John Wiley & Sons, New York, 545 pp.]
  • Linnaeus, C. (1758) Systema Naturae, Ed. X. Nantes and Pisces, Holmiae, 1 (1), 230-338. http://dx.doi.org/10.1002/iroh.3510610418
  • Lopez, J.A., Chen, W.J. & Orti, G. (2004) Esociform phylogeny. Copeia, 2004, 449-464. http://dx.doi.org/10.1643/cg-03-087r1
  • Loytynoja, A. & Millinkovitch, M.C. (2003) A hidden Markov model for progressive multiple alignment. Bioinformatics, 19, 1505-1513. http://dx.doi.org/10.1093/bioinformatics/btg193
  • Mabuchi, K., Okuda, N. & Nishida, M. (2006) Molecular phylogeny and stripe pattern evolution in the cardinalfish genus Apogon. Molecular Phylogenetics and Evolution, 38, 90-99. http://dx.doi.org/10.1016/j.ympev.2005.05.003
  • Maddison, W.P. & Maddison, D.R. (2000) MacClade, Version 4. Sinauer Associates, Sunderland, Massachusetts. http://dx.doi.org/10.1002/evan.1360030112
  • Maddison, W.P. & Maddison, D.R. (2011) Mesquite: a modular system for evolutionary analysis. Version 2.75. http://mesquiteproject.org
  • McCulloch, A.R. (1921) Studies in Australian fishes. No. 7. Records of the Australian Museum, 13 (4), 123-142. http://dx.doi.org/10.3853/j.0067-1975.13.1921.863
  • Mees, G.F. (1966) A new fish of the family Apogonidae from tropical Western Australia. J ournal of the Royal Society of Western Australia, 49 (3), 83-84.
  • Miya, M. & Nishida, M. (2000) Use of mitogenomic information in teleostean molecular phylogenetics: a tree-based exploration under the maximum parsimony optimality criterion. Molecular Phylogenetics and Evolution, 17, 437-455. http://dx.doi.org/10.1006/mpev.2000.0839
  • Near, T.J., Dornburg, A., Eytan, R.I., Keck, B.P., Smith, W.L., Kuhn, K.L., Moore, J.A., Price, S.A., Burbrink, F.T., Friedman, M. & Wainwright, P.C. (2013) Phylogeny and tempo of diversification in the super radiation of spiny-rayed fishes. Proceedings of the National Academy of Sciences of United States of America, 110, 12738-12743. http://dx.doi.org/10.1073/pnas.1304661110
  • Norman, J.R. (1966) A draft synopsis of the orders, families and genera of recent fishes and fish-like vertebrates. The British Museum (Natural History), London, 649 pp.
  • Pfeffer, G.J. (1893) Ostafrikanische Fische gesammelt von Herrn Dr. F. Stuhlmann in Jahre 1888 und 189. Jahrbuch der Hamburgischen Wissenschaftlichen Anstalten, 10, 131-177.
  • Prokofiev, A.M. (2006) A new genus of cardinalfishes (Perciformes: Apogonidae) from the South China Sea, with a discussion between the families Apogonidae and Kurtidae. Voprosy Iktiologii, 46, 293-305. [English in Journal of Ichthyology, 46 (4), 279-291]. http://dx.doi.org/10.1134/s0032945206040011
  • Radcliffe, L. (1912) Descriptions of fifteen new fishes of the family Cheilodipteridae, from the Philippine Islands and contiguous waters. [Scientific results of the Philippine cruise of the Fisheries steamer "Albatross," 1907-1910.--No. 13.]. Proceedings of the United States National Museum, 41 (1868), 431-446.
  • Ramsay, E.P. & Ogilby, J.D. (1887) Description of a new Australian Fish. Notes from the Australian Museum. Proceedings of the Linnean Society of New South Wales, Series 2, 1 (4), 1101-1102.
  • Randall, J.E. (2005) Reef and shore fishes of the South Pacific, New Caledonia to Tahiti and the Pitcairn Islands. University of Hawai'i Press, Honolulu, Hawaii, 707 pp.
  • Randall J.E. & Smith, C.L. (1988) Two new species and a new genus of cardinalfishes (Perciformes: Apogonidae) from Rapa, South Pacific Ocean. American Museum Novitates, 2926, 1-9.
  • Randall, J.E., Lachner, E.A. & Fraser, T.H. (1985) A revision of the Indo-Pacific apogonid fish genus Pseudamia, with descriptions of three new species. Indo-Pacific Fishes, 6, 1-23.
  • Regan, C.T. (1905) On a collection of fishes from the inland sea of Japan made by Mr. R. Gordon Smith. Annals and Magazine of Natural History, Series 7, 15, 17-26. http://dx.doi.org/10.1080/03745480509443634
  • Richardson, J. (1842) Contributions to the ichthyology of Australia. Annals and Magazine of Natural History, New Series, 9 (55), 15-31. http://dx.doi.org/10.1080/03745484209442950
  • Ronquist, F. & Huelsenbeck, J.P. (2003) MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19, 1572-1574. http://dx.doi.org/10.1093/bioinformatics/btg180
  • Schultz, L.P. (1940) Two new genera and three new species of cheilodipterid fishes, with notes on the other genera of the family. Proceedings of the United States National Museum, 88 (3085), 403-423.
  • Shimodaira, H. (2002) An approximately unbiased test of phylogenetic tree selection. Systematic Biology, 51, 492-508.
  • Shimodaira, H. & Hasegawa, M. (2001) CONSEL: for assessing the confidence of phylogenetic tree selection. Bioinformatics, 17, 1246-1247. http://dx.doi.org/10.1093/bioinformatics/17.12.1246
  • Smith, J.L.B. (1949) Sea fishes of southern Africa. Central News Agency, Ltd. Cape Town, i-xii+1-550.
  • Smith, J.L.B. (1954) Apogonid fishes of the subfamily Pseudamiinae from south-east Africa. Annals and Magazine of Natural History, Series 12, 7, 775-795. http://dx.doi.org/10.1080/00222935408651790
  • Smith, J.L.B. (1956 for 1955) The fishes of Aldabra. Part II. Annals and Magazine of Natural History, Series 12, 8 (93), 689-697. http://dx.doi.org/10.1080/00222935508655685
  • Smith, J.L.B. (1961) Fishes of the family Apogonidae of the western Indian Ocean and the Red Sea. Ichthyology Bulletin, 22, 373-418.
  • Smith, J.L.B. (1964) A new apogonid fish from deeper water of the Gulf of Guinea. Annals and Magazine of Natural History, Series 13, 6 (70), 621-624. http://dx.doi.org/10.1080/00222936308651406
  • Snodgrass, R.E. & Heller, E. (1905) Papers from the Hopkins-Stanford Galapagos Expedition, 1898-1899. XVII. Shore fishes of the Revillagigedo, Clipperton, Cocos and Galapagos Islands. Proceedings of the Washington Academy of Science, 6, 333-427.
  • Steindachner, F & Doderlein, L. (1883) Beitrage zur Kenntniss der Fische Japan's. (II). Denkschriften der Kaiserlichen Akademie der Wissenschafen in Wien, Mathematisch-Naturwissenshaftliche Classe, 48 (1), 1-40.
  • Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688-2690. http://dx.doi.org/10.1093/bioinformatics/btl446
  • Suresh, G.K. & Thomas, P.A. (2007) Three new records of apogonids (Order-Perciformes, Suborder - Percoidei from the Indian seas. Journal of the Marine Biological Association of India, 49 (1), 105-108.
  • Swofford, D.L. (1998) PAUP* phylogenetic analysis using parsimony (* and other methods), Version 4.0b10. Sunderland, MA: Sinauer Associates, Massachusetts.
  • Tanabe, A. (2011) Kakusan4 and Aminosan: two programs for comparing nonpartitioned, proportional and separate models for combined molecular phylogenetic analyses of multilocus sequence data. Molecular Ecology, 11, 914-921. http://dx.doi.org/10.1111/j.1755-0998.2011.03021.x
  • Tanaka, S. (1915) Ten new species of Japanese fishes. Dobutsugaku Zasshi, 27 (325), 565-568.
  • Thacker, C.E. & Roje, D.M. (2009) Phylogeny of cardinalfishes (Teleostei: Gobiiformes: Apogonidae) and the evolution of visceral bioluminescence. Molecular Phylogenetics and Evolution, 52, 735-745. http://dx.doi.org/10.1016/j.ympev.2009.05.017
  • Vagelli, A.A. (2011) The Banggai cardinalfish: natural history, conservation, and culture of Pterapogon kauderni. John Wiley & Sons, Chichester, UK, xiv+203. http://dx.doi.org/10.1002/9781119950387
  • Vaillant, L.L. (1877) Sur une espece nouvelle du genre Cheilodipterus. Bulletin de la Societe philomathique de Paris, Series 6, 12, 27-30.
  • Valenciennes, A. (1832) Descriptions de plusieurs especes nouvelles de poisons du genre Apogon. Nouvelles Annales du Museum d'Histoire Naturelle, 1, 51-59.
  • van der Laan, R., Fricke, R. & Eschmeyer, W.N. (2013) Family-group Names. Available from: http://research.calacademy.org/ ichthyology/catalog/family (accessed February 2014)
  • Weber, M. (1909) Diagnosen neuer Fische der Siboga-Expedition. Notes from the Leyden Museum, 31, 143-169.
  • Whitley, G.P. (1929) Names of fishes in Meuschen's index to the "Zoophylacium Gronovianum.". Records of the Australian Museum, 17 (6), 297-307. http://dx.doi.org/10.3853/j.0067-1975.17.1929.767