Published June 17, 2024
| Version v1
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A new antshrike (Aves: Thamnophilidae) endemic to the Caatinga and the role of climate oscillations and drainage shift in shaping cryptic diversity of Neotropical seasonal dry forests
Creators
- 1. Programa de Pós-graduação Em Zoologia, Museu Paraense Emílio Goeldi/Universidade Federal do Pará, Belém, Pará, Brazil & Laboratório de Biogeografia da Conservação e Macroecologia- BIOMACRO, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, Pará, Brazil & Instituto Tecnológico Vale, Belém, Pará, Brazil
- 2. Programa de Pós-graduação Em Zoologia, Museu Paraense Emílio Goeldi/Universidade Federal do Pará, Belém, Pará, Brazil & Laboratório de Biogeografia da Conservação e Macroecologia- BIOMACRO, Instituto de Ciências Biológicas, Universidade Federal do Pará, Belém, Pará, Brazil
- 3. Instituto Tecnológico Vale, Belém, Pará, Brazil & Programa de Pós-graduação Em Biodiversidade e Evolução, Museu Paraense Emílio Goeldi, Belém, Pará, Brazil
- 4. Programa de Pós-graduação Em Biodiversidade e Evolução, Museu Paraense Emílio Goeldi, Belém, Pará, Brazil
- 5. Departamento de Botânica e Zoologia, Universidade Federal Do Rio Grande Do Norte, Natal, Brazil
Description
Cerqueira, Pablo, Gonçalves, Gabriela R., Quaresma, Tânia F., Silva, Marcelo, Pichorim, Mauro, Aleixo, Alexandre (2024): A new antshrike (Aves: Thamnophilidae) endemic to the Caatinga and the role of climate oscillations and drainage shift in shaping cryptic diversity of Neotropical seasonal dry forests. Zoologica Scripta 53 (5): 487-508, DOI: 10.1111/zsc.12672, URL: https://doi.org/10.1111/zsc.12672
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References
- Allen, J. A. (1889). On the Maximilian types of south American birds in the American Museum of Natural History. Bulletin of the American Museum of Natural History, 2(19), 68. https://digit allibrary.amnh.org/handle/2246/690
- Allouche, O., Tsoar, A., & Kadmon, R. (2006). Assessing the accuracy of species distribution models: Prevalence, kappa and the true skill statistic (TSS). Journal of Applied Ecology, 43(6), 1223- 1232. https://doi.org/10.1111/j.1365-2664.2006.01214.x
- Barbet-Massin, M., Jiguet, F., Albert, C. H., & Thuiller, W. (2012). Selecting pseudo-absences for species distribution models: How, where and how many? Methods in Ecology and Evolution, 3(2), 327-338. https://doi.org/10.1111/j.2041-210X.2011.00172. x
- Barreto, A. M. F. (1996). Interpretacao Paleoambiental do Sistema de Dunas Fixadas do Medio Rio Sao Francisco. Universidade de Sao Paulo.
- Batalha-Filho, H., Fjeldsa, J., Fabre, P.-H., & Miyaki, C. Y. (2013). Connections between the Atlantic and the Amazonian forest avifauna represent distinct historical events. Journal of Ornithology, 154(1), 41-50. https://doi.org/10.1007/s1033 6-012-0866-7
- Batalha-Filho, H., & Miyaki, C. Y. (2016). Late Pleistocene divergence and postglacial expansion in the Brazilian Atlantic Forest: Multilocus phylogeography of Rhopias gularis (Aves: Passeriformes). Journal of Zoological Systematics and Evolutionary Research, 54(2), 137-147. https://doi.org/10.1111/ jzs.12118
- Bouckaert, R., Heled, J., Kuhnert, D., Vaughan, T., Wu, C.-H., Xie, D., Suchard, M. A., Rambaut, A., & Drummond, A. J. (2014). BEAST 2: A software platform for Bayesian evolutionary analysis. PLoS Computational Biology, 10(4), e1003537. https://doi. org/10.1371/journal.pcbi.1003537
- Bravo, G. A., Whitney, B. M., Belmonte-Lopes, R., Bornschein, M. R., Aristizabal, N., Beco, R., Battilana, J., Naka, L. N., Aleixo, A., Pie, M. R., Silveira, L. F., Derryberry, E. P., & Brumfield, R. T. (2021). Phylogenomic analyses reveal non-monophyly of the antbird genera Herpsilochmus and Sakesphorus (Thamnophilidae), with description of a new genus for Herpsilochmus sellowi. Ornithology, 138, 1-16. https://doi.org/10.1093/ornithology/ ukab025
- Broennimann, O., Fitzpatrick, M. C., Pearman, P. B., Petitpierre, B., Pellissier, L., Yoccoz, N. G., Thuiller, W., Fortin, M.-J., Randin, C., Zimmermann, N. E., Graham, C. H., & Guisan, A. (2012). Measuring ecological niche overlap from occurrence and spatial environmental data. Global Ecology and Biogeography, 21, 481-497. https://doi.org/10.1111/j.1466-8238.2011.00698.x
- Brumfield, R. T., & Edwards, S. V. (2007). Evolution into and out of the Andes: A Bayesian analysis of historical diversification in Thamnophilus antshrikes. Evolution, 61(2), 346-367. https:// doi.org/10.1111/j.1558-5646.2007.00039.x
- Bruschi, D. P., Peres, E. A., Lourenco, L. B., De Macedo Bartoleti, L. F., Sobral-Souza, T., & Recco-Pimentel, S. M. (2019). Signature of the paleo-course changes in the Sao Francisco river as source of genetic structure in neotropical Pithecopus nordestinus (Phyllomedusinae, Anura) treefrog. Frontiers in Genetics, 10(JUL), 1-16. https://doi.org/10.3389/fgene.2019.00728
- Buainain, N., Gaspar, M. L., & de Assis, C. P. (2016). Detailed description and seasonal variation in the diet of the silvery-cheeked Antshrike Sakesphorus cristatus (Wied, 1831) (Aves: Thamnophilidae) in a Brazilian semi-arid forest. Revista Brasileira de Ornitologia, 23(4), 405-416.
- Caetano, S., Prado, D., Pennington, R. T., Beck, S., Oliveira-Filho, A., Spichiger, R., & Naciri, Y. (2008). The history of seasonally dry tropical forests in eastern South America: Inferences from the genetic structure of the tree Astronium urundeuva (Anacardiaceae). Molecular Ecology, 17(13), 3147-3159. https:// doi.org/10.1111/j.1365-294X.2008.03817.x
- Capelli, D., Batalha-Filho, H., & Japyassu, H. F. (2020). Song variation in the Caatinga suboscine silvery-cheeked Antshrike (Sakesphorus cristatus) suggests latitude and Sao Francisco River as drivers of geographic variation. Journal of Ornithology, 161(3), 873-884. https://doi.org/10.1007/s10336-020-01779-4
- Carneiro, L. S., Gonzaga, L. P., Rego, P. S., Sampaio, I., Schneider, H., & Aleixo, A. (2012). Systematic revision of the spotted Antpitta (Grallariidae: Hylopezus macularius), with description of a cryptic new species from Brazilian Amazonia. The Auk, 129(2), 338-351. https://doi.org/10.1525/auk.2012.11157
- Claramunt, S. (2021). Flight efficiency explains difference in natal dispersal distances in birds. Ecology, 102(9), 1-12. https://doi. org/10.1002/ecy.3442
- Claramunt, S., & Wright, N. A. (2017). Using museum specimens to study flight and dispersal. In M. S. Webster (Ed.), Emerging frontiers in collections-based ornithological research: The extended specimen. Studies in avian biology 50 (pp. 127-141). American Ornithological Society.
- Coetzee, B. W. T., Robertson, M. P., Erasmus, B. F. N., van Rensburg, B. J., & Thuiller, W. (2009). Ensemble models predict important bird areas in southern Africa will become less effective for conserving endemic birds under climate change. Global Ecology and Biogeography, 18(6), 701-710. https://doi.org/10.1111/j. 1466-8238.2009.00485.x
- Costa, W. J. E. M., Amorim, P.F., & Mattos, J. L. O. (2018). Synchronic historical patterns of species diversification in seasonal aplocheiloid killifishes of the semi-arid Brazilian Caatinga. PLoS One, 13, 1-10. https://doi.org/10.1371/journal.pone.0193021
- Coutinho-Abreu, I. V., Sonoda, I. V., Fonseca, J. A., Melo, M. A., Balbino, V. Q., & Ramalho-Ortigao, M. (2008). Lutzomyia longipalpis s.l. in Brazil and the impact of the Sao Francisco River in the speciation of this sand fly vector. Parasites & Vectors, 1(1), 16. https://doi.org/10.1186/1756-3305-1-16
- Da Silva, J. M. C., Barbosa, L. C. F., Leal, I. R., & Tabarelli, M. (2017). The Caatinga: Understanding the challenges. In J. M. C. da Silva, I. R. Leal, & M. Tabarelli (Eds.), Caatinga the largest tropical dry Forest region in South America (pp. 3-19). Springer International Publishing. https://doi.org/10.1007/978-3-319- 68339-3
- Darriba, D., Taboada, G. L., Doallo, R., & Posada, D. (2012). jModelTest 2: More models, new heuristics and parallel computing. Nature Methods, 9(8), 772.
- de Andrade, A. F. A., Velazco, S. J. E., & De Marco Junior, P. (2020). ENMTML: An R package for a straightforward construction of complex ecological niche models. Environmental Modelling and Software, 125(December 2019), 104615. https://doi.org/10. 1016/j.envsoft.2019.104615
- De Araujo, H. F. P., & Da Silva, J. M. C. (2017). The avifauna of the Caatinga: Biogeography, ecology, and conservation. In J. M. C. da Silva, I. R. Leal, & M. Tabarelli (Eds.), Caatinga the largest tropical dry Forest region in South America. Springer International Publishing. https://doi.org/10.1007/978-3-319- 68339-3
- de Wied-Neuwied, M. (1831). Thamnophilus cristatus - Der Batara mit schwarzer Haube. In Beitrage zur Naturgeschichte von Brasilien (3rd ed., pp. 1002-1006). Biodiversity Heritage Library.
- de Wied-Neuwied, M. (1940). Viagem ao Brasil (1st ed.). Companhia Editora Nacional.
- Dias, C., Lima, K. A., Araripe, J., Aleixo, A., Vallinoto, M., Sampaio, I., Schneider, H., & Rego, P. S. (2018). Mitochondrial introgression obscures phylogenetic relationships among manakins of the genus Lepidothrix (Aves: Pipridae). Molecular Phylogenetics and Evolution, 126, 314-320. https://doi.org/10.1016/j.ympev. 2018.04.017
- do Amaral, F. R., Albers, P. K., Edwards, S. V., & Miyaki, C. Y. (2013). Multilocus tests of Pleistocene refugia and ancient divergence in a pair of Atlantic Forest antbirds (Myrmeciza). Molecular Ecology, 22(15), 3996-4013. https://doi.org/10.1111/mec.12361
- Drummond, A. J., Ho, S. Y. W., Rawlence, N., & Rambaut, A. (2007). A Rough Guide to BEAST 1.4. http://code.google.com/p/beast -mcmc/download/list
- Faria, M. B., Nascimento, F. F., Oliveira, J. A., & Bonvicino, C. R. (2013). Biogeographic determinants of genetic diversification in the mouse opossum Gracilinanus agilis (Didelphimorphia: Didelphidae). Journal of Heredity, 104(5), 613-626. https://doi. org/10.1093/jhered/est039
- Ferreira, M., Fernandes, A. M., Aleixo, A., Antonelli, A., Olsson, U., Bates, J. M., Cracraft, J., & Ribas, C. C. (2018). Evidence for mtDNA capture in the jacamar Galbula leucogastra/chalcothorax species complex and insights on the evolution of whitesand ecosystems in the Amazon basin. Molecular Phylogenetics and Evolution, 129, 149-157. https://doi.org/10.1016/j.ympev. 2018.07.007
- Franco, F. F., & Manfrin, M. H. (2013). Recent demographic history of cactophilic drosophila species can be related to quaternary palaeoclimatic changes in South America. Journal of Biogeography, 40(1), 142-154. https://doi.org/10.1111/j.1365- 2699.2012.02777.x
- Gehara, M., Garda, A. A., Oliveira, E. F., da Fonseca, E. M., Camurugi, F., Magalhaes, F. M., Lanna, F. M., Sites, J. W., Jr., Marques, R., Silveira-Filho, R., Sao Pedro, V. A., Colli, G. R., Costa, G. C., & Burbrink, F. T. (2017). Estimating synchronous demographic changes across populations using hABC and its application for a herpetological community from northeastern Brazil. Molecular Ecology, 26(May), 4756-4771. https://doi.org/ 10.1111/mec.14239
- Gill, F. (2014). Species taxonomy of birds: Which null hypothesis? Auk, 131, 150-161. https://doi.org/10.1642/auk-13-206.1
- Goncalves, G. S. R., Cerqueira, P. V., Silva, D. P., Gomes, L. B., Leao, C. F., de Andrade, A. F. A., & Santos, M. P. D. (2023). Multitemporal ecological niche modeling for bird conservation in the face of climate change scenarios in Caatinga, Brazil. PeerJ, 11, e14882. https://doi.org/10.7717/peerj.14882
- Grantsau, R. (2010). Guia completo para identificacao das aves do Brasil (Vol. 2). Vento Verde.
- Guo, Q., Kelly, M., & Graham, C. H. (2005). Support vector machines for predicting distribution of sudden oak death in California. Ecological Modelling, 182(1), 75-90. https://doi.org/10.1016/j. ecolmodel.2004.07.012
- Haffer, J. (1969). Speciation in Amazonian forest firds. Science, 165, 131-137.
- Haffer, J., & Prance, G. T. (2001). Climatic forcing of evolution in Amazonia during the Cenozoic: On the refuge theory of biotic differentiation. Amazoniana, 16(3), 579-607.
- Hall, T. A. (1999). BioEdit: A user-friendly biological sequence alignment editor and analysis program for windows 95/98/NT. Nucleic Acids Symposium Series, 41, 95-98.
- Heled, J., & Drummond, A. J. (2008). Bayesian inference of population size history from multiple loci. BMC Evolutionary Biology, 8, 289. https://doi.org/10.1186/1471-2148-8-289
- Heled, J., & Drummond, A. J. (2010). Bayesian inference of species trees from multilocus data. Molecular Biology and Evolution, 27(3), 570-580. https://doi.org/10.1093/molbev/msp274
- Hijmans, R. J., Cameron, S. E., Parra, J. L., Jones, P. G., & Jarvis, A. (2005). Very high resolution interpolated climate surfaces for global land areas. International Journal of Climatology, 25(15), 1965-1978. https://doi.org/10.1002/joc.1276
- IBGE. (1985). Atlas Nacional do Brasil. IBGE.
- Isler, M. L., Isler, P. R., & Whitney, B. M. (2007). Species limits in antbirds (Thamnophilidae): The warbling Antbird (Hypocnemis cantator) complex. The Auk, 124(1), 11-28. https://doi.org/10. 1642/0004-8038(2007)124%5B11:SLIATT%5D2.0.CO%3B2
- Isler, M. L., Isler, P. R., & Whitney, B. M. (1998). Use of vocalizations to establish species limits in antbirds (Passeriformes: Thamnophilidae). The Auk, 115(3), 577-590. https://doi.org/ 10.2307/4089407
- King, L. C. (1956). A geomorfologia do Brasil Oriental. Revista Brasileira de Geografia, 2, 147-265.
- Lima, P. C., Grantsau, R., Cassia, R., Lima, F. R., Lima-Neto, T. N. C., & Silva, L. E. S. (2010). Ninhos de especies ameacadas, endemicas e outras de comportamento reprodutivo pouco conhecido, na patria da Arara-Azul-de-Lear (Anodorhynchus leari) (Psittaciformes: Psittacidae), destacando-se novos dados sobre o comportamento reprodutivo do besourinho-de-caudalarga (Phaethornis gounellei) (Apodiformes: Trochilidae) a descricao do ninho da choca-do-nordeste (Sakesphorus cristatus) (Passeriformes: Thamnophilidae) e do jacucaca (Penelope jacucaca) (Galliformes: Cracidae). Atualidades Ornitologicas, 153, 69-161.
- Lima-Ribeiro, M. S., Varela, S.,Gonzalez-Hernandez, J.,Oliveira, G.,Diniz-Filho, J. A. F., &Terribile, L. C. (2015). EcoClimate: A database of climate data from multiple models for past, present, and future for macroecologists and biogeographers. Biodiversity Informatics, 10, 1-21. https://doi.org/10.17161/bi.v10i0.4955
- Mabesoone, J. M. (1994). Sedimentary basins of Northeast Brazil. Federal University of Pernambuco.
- Menezes, R. S. T., Brady, S. G., Carvalho, A. F., Del Lama, M. A., & Costa, M. A. (2017). The roles of barriers, refugia, and chromosomal clines underlying diversification in Atlantic Forest social wasps. Scientific Reports, 7(1), 7689. https://doi.org/10.1038/ s41598-017-07776-7
- Mooney, H. A., Bullock, S. H., & Medina, E. (1995). Introduction. In S. H. Bullock, H. A. Mooney, & E. Medina (Eds.), Seasonally dry tropical forests (pp. 1-8). Cambridge University Press.
- Muscarella, R., Galante, P. J., Soley-Guardia, M., Boria, R. A., Kass, J. M., Uriarte, M., & Anderson, R. P. (2014). ENMeval: An R package for conducting spatially independent evaluations and estimating optimal model complexity for MAXENT ecological niche models. Methods in Ecology and Evolution, 5(11), 1198- 1205. https://doi.org/10.1111/2041-210X.12261
- Nascimento, F. F., Lazar, A., Menezes, A. N., Durans Ada, M., Moreira, J. C., Salazar-Bravo, J., D'Andrea, P. S., & Bonvicino, C. R. (2013). The role of historical barriers in the diversification processes in open vegetation formations during the Miocene/ Pliocene using an ancient rodent lineage as a model. PLoS One, 8(4), e61924. https://doi.org/10.1371/journal.pone.0061924
- Nascimento, F. F., Pereira, L. G., Geise, L., Bezerra, A. M. R., D'Andrea, P. S., & Bonvicino, C. R. (2011). Colonization process of the brazilian common vesper mouse, Calomys expulsus (Cricetidae, Sigmodontinae): A biogeographic hypothesis. Journal of Heredity, 102(3), 260-268. https://doi.org/10.1093/ jhered/esr012
- Oliveira, E. F., Gehara, M., Sao-Pedro, V. A., Chen, X., Myers, E. A., Burbrink, F. T., Mesquita, D. O., Garda, A. A., Colli, G. R., Rodrigues, M. T., Arias, F. J., Zaher, H., Santos, R. M., & Costa, G. C. (2015). Speciation with gene flow in whiptail lizards from a Neotropical xeric biome. Molecular Ecology, 34, 5957-5975. https://doi.org/10.1111/mec.13433
- Otto-Bliesner, B. L., Marshall, S. J., Overpeck, J. T., Miller, G. H., & Hu, A. (2006). Simulating Arctic climate warmth and Icefield retreat in the last Interglaciation. Science, 311(5768), 1751- 1753. https://doi.org/10.1126/science.1120808
- Passoni, J. C., Benozzati, M. L., & Rodrigues, M. T. (2008). Phylogeny, species limits, and biogeography of the Brazilian lizards of the genus Eurolophosaurus (Squamata: Tropiduridae) as inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution, 46(2), 403-414. https://doi.org/10.1016/j.ympev. 2007.10.022
- Paynter, R. A., Jr., & Traylor, M. A., Jr. (1991). Ornithological gazetteer of Brazil. Museum of Comparative Zoology, Cambridge.
- Pennington, R. T., Lewis, G. P., & Ratter, J. A. (2006). An overview of the plant diversity, biogeography and conservation of Neotropical savannas and seasonally dry forests. In R. T. Pennington, G. P. Lewis, & J. A. Ratter (Eds.), Neotropical savannas and seasonally dry forests: Plant diversity, biogeography and conservation (pp. 1-29). CRC Press.
- Pennington, R. T., Prado, D. E., & Pendry, C. A. (2000). Neotropical seasonally dry forests and quaternary vegetation changes. Journal of Biogeography, 27, 261-273. https://doi.org/10.1046/j. 1365-2699.2000.00397.x/full
- Peterson, A. T. (2011). Ecological niche conservatism: A timestructured review of evidence. Journal of Biogeography, 38, 817-827. https://doi.org/10.1111/j.1365-2699.2010.02456.x
- Peterson, A. T., Soberon, J., & Sanchez-Cordero, V. (1999). Conservatism of ecological niches in evolutionary time. Science, 285, 1265-1267. https://doi.org/10.1126/science.285.5431.1265
- Phillips, S. J., Anderson, R. P., & Schapire, R. E. (2006). Maximum entropy modeling of species geographic distributions. Ecological Modelling, 190(3-4), 231-259. https://doi.org/10.1016/j.ecolm odel.2005.03.026
- Potter, P. E. (2003). Potter 1997 the Mesozoic and Cenozoic paleodrainage of South America a natural history. Journal of South American Earth Sciences, 10(5), 331-344. https://doi.org/ 10.1016/S0895-9811(97)00031-X
- Prado, D. E. (2000). Seasonally dry forests of tropical South America: From forgotten ecosystems to a new phytogeographic unit. Edinburgh Journal of Botany, 57(3), 437-461. http://journals. cambridge.org/abstract_S096042860000041X
- Prado, D. E., & Gibbs, P. E. (1993). Patterns of species distributions in the dry seasonal forests of South America. Annals of the Missouri Botanical Garden, 80(4), 902-927. http://www.jstor. org/stable/2399937
- Prasad, A. M., Iverson, L. R., & Liaw, A. (2006). Newer classification and regression tree techniques: Bagging and random forests for ecological prediction. Ecosystems, 9(2), 181-199. https://doi. org/10.1007/s10021-005-0054-1
- R Core Team. (2023). R: A language and environment for statistical computing. R Foundation for Statistical Computing. https:// www.R-project.org/
- Rambaut, A., & Drummond, A. (2009). TRACER, Version 1.5. http:// beast.bio.ed.ac.uk/Tracer
- Rannala, B., & Yang, Z. (2003). Bayes estimation of species divergence times and ancestral population sizes using DNA sequences from multiple loci. Genetics, 164, 1645-1656.
- Rannala, B., & Yang, Z. (2013). Improved reversible jump algorithms for Bayesian species delimitation. Genetics, 194, 245-253.
- Ratter, J. A., Askew, G. P., Montgomery, R., & Gifford, D. R. (1978). Observations on forests of some mesotrophic soils in central Brazil. Revista Brasileira de Botanica, 1, 47-58.
- Remsen, J. V., Jr. (1984). Geographic variation, zoogeography and possible rapid evolution in some Cranioleuca spinetails (Furnariidae) of the Andes. The Wilson Bulletin, 96(4), 515-523.
- Ribas, C. C., Aleixo, A., Gubili, C., d'Horta, F. M., Brumfield, R. T., & Cracraft, J. (2018). Biogeography and diversification of Rhegmatorhina (Aves: Thamnophilidae): Implications for the evolution of Amazonian landscape during the quaternary. Journal of Biogeography, 45(4), 917-928. https://doi.org/10. 1111/jbi.13169
- Rocchini, D., Hortal, J., Lengyel, S., Lobo, J. M., Jimenez-Valverde, A., Ricotta, C., Bacaro, G., & Chiarucci, A. (2011). Accounting for uncertainty when mapping species distributions: The need for maps of ignorance. Progress in Physical Geography: Earth and Environment, 35(2), 211-226. https://doi.org/10.1177/ 0309133311399491
- Rodrigues, M. T. (1986). Um novo Tropidurus com crista dorsal do Brasil com comentarios sobre suas relacoes, distribuicao e origem (Sauria, Iguanidae). Papeis Avulsos de Zoologia. Sao Paulo, 36(17), 171-179.
- Rodrigues, M. T. (2006). Lizards, snakes, and Amphisbaenians from the quaternary sand dunes of the middle Rio Sao Francisco, Bahia, Brazil. Journal of Herpetology, 30(4), 513. https://doi.org/10.2307/1565694
- Ronquist, F., & Huelsenbeck, J. P. (2003). MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics, 19(12), 1572-1574.
- Sambrook, J., Fritsch, E. F., & Maniatis, T. (1989). Molecular cloning: A laboratory manual (2nd ed.). Cold Spring Harbor Laboratory Press.
- Santos, B. F., Scherrer, M. V., & Loss, A. C. (2018). Neither barriers nor refugia explain genetic structure in a major biogeographic break: Phylogeography of praying mantises in the Brazilian Atlantic Forest. Mitochondrial DNA Part A DNA Mapping, Sequencing, and Analysis, 29, 1284-1292. https://doi.org/10. 1080/24701394.2018.1445242
- Santos, M. P. D., Santana, A., Soares, L. M., & Sousa, S. (2012). Avifauna of Serra Vermelha, southern Piaui, Brazil. Revista Brasileira de Ornitologia, 20(3), 199-214.
- Scholkopf, B., Platt, J. C., Shawe-Taylor, J., Smola, A. J., & Williamson, R. C. (2001). Estimating the support of a high-dimensional distribution. Neural Computation, 13(7), 1443-1471. https://doi. org/10.1162/089976601750264965
- Siedchlag, A. C., Benozzati, M. L., Passoni, J. C., & Rodrigues, M. T. (2010). Genetic structure, phylogeny, and biogeography of Brazilian eyelid-less lizards of genera Calyptommatus and Nothobachia (Squamata, Gymnophthalmidae) as inferred from mitochondrial DNA sequences. Molecular Phylogenetics and Evolution, 56(2), 622-630. https://doi.org/10.1016/j.ympev. 2010.04.027
- Silva, D. P., Vilela, B., De Marco, P., & Nemesio, A. (2014). Using ecological niche models and niche analyses to understand speciation patterns: The case of sister neotropical orchid bees. PLoS One, 9, 1-17. https://doi.org/10.1371/journal.pone. 0113246
- Silva, J. M. C., & Bates, J. M. (2002). Biogeographic patterns and conservation in the south American Cerrado : A tropical savanna hotspot. Bioscience, 52(3), 225-233.
- Silva, S. M., Peterson, A. T., Carneiro, L., Burlamaqui, T. C. T., Ribas, C., Sousa-Neves, T., Miranda, L. S., Fernandes, A. M., d'Horta, F. M., Araujo-Silva, L. E., Batista, R., Bandeira, C. H. M. M., Dantas, S. M., Ferreira, M., Martins, D. M., Oliveira, J., Rocha, T. C., Sardelli, C. H., Thom, G., … Aleixo, A. (2019). A dynamic continental moisture gradient drove Amazonian bird diversification. Science Advances, 5(7), eaat5752. https://doi.org/10. 1126/sciadv.aat5752
- Smith, B. T., Ribas, C. C., Whitney, B. M., Hernandez-Banos, B. E., & Klicka, J. (2013). Identifying biases at different spatial and temporal scales of diversification: A case study in the Neotropical parrotlet genus Forpus. Molecular Ecology, 22, 483-494. https:// doi.org/10.1111/mec.12118
- Smithe, F. B. (1975). Naturalist's color guide. American Museum of Natural History.
- Soberon, J. (2007). Grinnellian and Eltonian niches and geographic distributions of species. Ecology Letters, 10, 1115-1123. https:// doi.org/10.1111/j.1461-0248.2007.01107.x
- Solomon, S. E., Bacci, M., Martins, J., Vinha, G. G., & Mueller, U. G. (2008). Paleodistributions and comparative molecular phylogeography of leafcutter ants (Atta spp.) provide new insight into the origins of Amazonian diversity. PLoS One, 3(7), e2738. https://doi.org/10.1371/journal.pone.0002738
- Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei, M., & Kumar, S. (2011). MEGA5: Molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony Methods. Molecular Biology and Evolution, 28(10), 2731-2739. https://doi.org/10.1093/molbev/msr121
- Tax, D. M. J., & Duin, R. P. W. (2004). Support vector data description. Machine Learning, 43(54), 45-66.
- Taylor, N., & Zappi, D. C. (2004). Cacti of eastern Brazil. Royal Botanic Gardens. Royal Botanic Gardens.
- Thome, M. T. C., Sequeira, F., Brusquetti, F., Carstens, B., Haddad, C. F. B., Rodrigues, M. T., & Alexandrino, J. (2016). Recurrent connections between Amazon and Atlantic forests shaped diversity in Caatinga four-eyed frogs. Journal of Biogeography, 43(5), 1045-1056. https://doi.org/10.1111/jbi. 12685
- Tobias, J. A., Sheard, C., Pigot, A. L., Devenish, A. J. M., Yang, J., Sayol, F., Neate-Clegg, M. H. C., Alioravainen, N., Weeks, T. L., Barber, R. A., Walkden, P. A., MacGregor, H. E. A., Jones, S. E. I., Vincent, C., Phillips, A. G., Marples, N. M., Montano-Centellas, F. A., Leandro-Silva, V., Claramunt, S., … Schleuning, M. (2022). AVONET: Morphological, ecological and geographical data for all birds. Ecology Letters, 25, 581-597. https://doi. org/10.1111/ele.13898
- Tomotani, B. M., & Silveira, L. F. (2016). A reassessment of the taxonomy of Crypturellus noctivagus (Wied, 1820). Revista Brasileira de Ornitologia, 24(1), 34-45. https://doi.org/10.1007/ bf03544327
- Tricart, T. (1974). Existence de periodes seches au quaternaire en Amazonie et dans les regions voisines. Revue de Geomorphologie Dynamique, 4, 125-158.
- Valavi, R., Elith, J., Lahoz-Monfort, J. J., & Guillera-Arroita, G. (2018). BLOCKCV: An R package for generating spatially or environmentally separated folds for k-fold cross-validation of species distribution models. Methods in Ecology and Evolution, 10(2), 225-232. https://doi.org/10.1111/2041- 210X.13107
- Varela, S., Lima-Ribeiro, M. S., & Terribile, L. C. (2015). A short guide to the climatic variables of the last glacial maximum for biogeographers. PLoS One, 10(6), e0129037. https://doi.org/10. 1371/journal.pone.0129037
- Weir, J. T., & Schluter, D. (2008). Calibrating the avian molecular clock. Molecular Ecology, 17, 2321-2328. https://doi.org/10. 1111/j.1365-294X.2008.03742.x
- Werneck, F. P. (2011). The diversification of eastern south American open vegetation biomes: Historical biogeography and perspectives. Quaternary Science Reviews, 30, 1630-1648. https://doi. org/10.1016/j.quascirev.2011.03.009
- Werneck, F. P., Leite, R. N., Geurgas, S. R., & Rodrigues, M. T. (2015). Biogeographic history and cryptic diversity of saxicolous Tropiduridae lizards endemic to the semiarid Caatinga. BMC Evolutionary Biology, 15(1), 94. https://doi.org/10.1186/s1286 2-015-0368-3
- Yang, Z., & Rannala, B. (2010). Bayesian species delimitation using multilocus sequence data. Proceedings of the National Academy of Sciences of the United States of America, 107, 9264-9269.
- Zimmer, K., Isler, M. L., & de Juana, E. (2003). Silvery-cheeked Antshrike (Sakesphorus cristatus). In J. del Hoyo, A. Elliott, J. Sargatal, D. A. Christie, & E. de Juana (Eds.), Handbook of the birds of the world alive. Linx Edicions. http://www.hbw.com/ node/56656