Published October 16, 2024
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Half of the Diversity Undescribed: Integrative Taxonomy Reveals 32 New Species and a High Cryptic Diversity in the Scopariinae and Crambinae of the Philippines (Lepidoptera: Crambidae)
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- 1. Museum fuer Naturkunde Berlin, Leibniz-Institut fuer Evolutions- und Biodiversitaetsforschung
Description
Léger, Théo (2024): Half of the Diversity Undescribed: Integrative Taxonomy Reveals 32 New Species and a High Cryptic Diversity in the Scopariinae and Crambinae of the Philippines (Lepidoptera: Crambidae). Bulletin of the Society of Systematic Biologists 3 (2): 1-93, DOI: 10.18061/bssb.v3i2.9527, URL: https://doi.org/10.18061/bssb.v3i2.9527
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References
- Ahrens, D., Fujisawa, T., Krammer, H. J., Eberle, J., Fabrizi, S., & Vogler, A. P. (2016). Rarity and incomplete sampling in DNA-based species delimitation. Syst Biol, 65(3), 478-494. https://doi.org/10.1093/sysbio/syw002
- Anon. (2019). Dossiers on CHILO species as pests of sugarcane. Sugar Research Australia Limited.
- Bandelt, H. J., Forster, P., & Rohl, A. (1999). Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol, 16(1), 37-48. https://doi.org/10.1093/ oxfordjournals.molbev.a026036
- Barrion, A. T., Catindig, J. L. A., & Litsinger, J. A. (1990). Chilo auricilius Dudgeon (Lepidoptera: Pyralidae), the correct name for the dark-headed stem borer (SB) found in the Philippines. International Rice Research Newsletter, 15(4), 29.
- Bassi, G. (2013). Revisione delle specie afrotropicali del genere Ancylolomia Hubner,[1825]. I: i gruppi indica e chrysargyria (Lepidoptera: Pyralidae, Crambinae). Shilap-rev Lepidopt, 41(164), 517-529.
- Beever, J. E., & Dugdale, J. S. (1994). Bryological Notes: Bryophagy of Dawsonia superba Grev. by larvae of the crambid moth Glaucocharis epiphaea (Meyrick) in New Zealand. J Bryol, 18(2), 365-366. https://doi.org/10.1179/jbr.1994.18.2.365
- Berba, C. M. P., & Matias, A. M. A. (2022). State of biodiversity documentation in the Philippines: Metadata gaps, taxonomic biases, and spatial biases in the DNA barcode data of animal and plant taxa in the context of species occurrence data. PeerJ, 10, e13146. https://doi.org/10.7717/peerj.13146/supp-1
- Bleszynski, S. (1961). Revision of the World species of the Family Crambidae (Lepidoptera). Part I. Genus Calamotropha Zell. Acta Zool Cracov, 6(7), 137-272.
- Bleszynski, S. (1965). Crambinae. In H. G. Amsel, F. Gregor, & H. Reisser (Eds.), Microlepidoptera Palaearctica (Vol. 1).
- Bleszynski, S. (1966). Further taxonomic notes on some tropical species. Acta Zool Cracov, 11(15), 451-497.
- Bleszynski, S. (1970a). A revision of the genus Culladia Moore (Studies on the Crambinae, Lepidoptera, Pyralidae, Part 50). Tijdschr Entomol, 113, 44-59.
- Bleszynski, S. (1970b). A revision of the Oriental species of the genus Ancylolomia Hubner (Studies on the Crambinae, Lepidoptera, Pyralidae, Part 49). Tijdschr Entomol, 113, 27-43.
- Bleszynski, S. (1970c). A revision of the world species of Chilo Zincken (Lepidoptera: Pyralidae). Bull Br Mus, 25(4), 101-195. https://doi.org/10.5962/ bhl.part.19677
- Brown, R. M., Siler, C. D., Oliveros, C. H., Esselstyn, J. A., Diesmos, A. C., Hosner, P. A., Linkem, C. W., Barley, A. J., Oaks, J. R., & Sanguila, M. B. (2013). Evolutionary processes of diversification in a model island archipelago. Annu Rev Ecol Evol Syst, 44, 411-435. https://doi.org/10.1146/annurevecolsys-110411-160323
- Brown, S. D., Collins, R. A., Boyer, S., Lefort, M. C., Malumbres-Olarte, J., Vink, C. J., & Cruickshank, R. H. (2012). Spider: An R package for the analysis of species identity and evolution, with particular reference to DNA barcoding. Mol Ecol Resour, 12(3), 562-565. https://doi.org/10.1111/ j.1755-0998.2011.03108.x
- Bruschini, C., Edwards, E. D., Talavera, G., Vaurasi, V. D., Latu, G. F., & Dapporto, L. (2023). A complete COI library of Samoan butterflies reveals layers of endemic diversity on oceanic islands. Zool Scr, 52, 315-330. https://doi.org/10.1111/zsc.12588
- Calora, F. B., & Reyes, S. C. (1972). The ecology of rice stem borers in the Philippines. Japan Pesticide Information, 10, 111-112.
- Cong, Q., Shen, J., Borek, D., Robbins, R. K., Opler, P. A., Otwinowski, Z., & Grishin, N. V. (2017). When COI barcodes deceive: Complete genomes reveal introgression in hairstreaks. Proc R Soc B, 284(1848), 20161735. https://doi.org/10.1098/rspb.2016.1735
- Craft, K. J., Pauls, S. U., Darrow, K., Miller, S. E., Hebert, P. D., Helgen, L. E., Novotny, V., & Weiblen, G. D. (2010). Population genetics of ecological communities with DNA barcodes: An example from New Guinea Lepidoptera. PNAS, 107(11), 5041-5046. https://doi.org/10.1073/pnas.0913084107
- de Jong, R., & Treadaway, C. G. (1993). The Hesperiidae (Lepidoptera) of the Philippines (Vol. 288). Nationaal Natuurhistorisch Museum.
- Diakonoff, A. N. (1968). Microlepidoptera of the Philippine Islands. Bull US Nat Mus, 257, 1-458. https://doi.org/10.5479/si.03629236.257.1
- Diamond, J. M., & Gilpin, M. E. (1983). Biogeographic umbilici and the origin of the Philippine avifauna. Oikos, 41, 307-321. https://doi.org/10.2307/3544090
- Dickerson, R. E. (1928). Distribution of life in the Philippines. Philippine Bureau of Science.
- Dickinson, E. C., Kennedy, R. S., & Parkes, K. C. (1991). The birds of the Philippines: An annotated check-list (Issue 12). British Ornithologists' Union.
- Doorenweerd, C., Lee, K. M., van Nieukerken, E. J., & Mutanen, M. (2022). Phylogenomic inference of two widespread European leaf miner species complexes suggests mechanisms for sympatric speciation (Lepidoptera: Nepticulidae: Ectoedemia). Syst Ent, 48(2), 341-353. https://doi.org/10.1111/syen.12579
- Gaskin, D. E. (1971). Revision of New Zealand Diptychophorini (Lepidoptera: Pyralidae: Crambinae). NZ Jl Sci, 14(4), 759-809.
- Gaskin, D. E. (1985). Morphology and Reclassification of the Australasian, Melanesian and Polynesian Glaucocharis Meyrick (Lepidoptera: Crambinae: Diptychophorini). Aust J Zool Suppl Ser, 33(115), 1-75. https://doi.org/10.1071/AJZS115
- Geller, J., Meyer, C., Parker, M., & Hawk, H. (2013). Redesign of PCR primers for mitochondrial cytochrome c oxidase subunit I for marine invertebrates and application in all-taxa biotic surveys. Mol Ecol Resour, 13(5), 851-861. https://doi.org/10.1111/1755-0998.12138
- Glime, J. (2017). Terrestrial Insects: Holometabola - Lepidoptera: Tortricoidea - Papilionoidea. In J. Glime (Ed.), Bryophyte Ecology (Vol. 2, pp. 12-14).
- Hall, R. (1998). The plate tectonics of Cenozoic SE Asia and the distribution of land and sea. In Biogeography and Geological Evolution of SE Asia (pp. 99-131).
- Heaney, L. R. (1986). Biogeography of mammals in SE Asia: Estimates of rates of colonization, extinction and speciation. Biol J Linn Soc, 28(1-2), 127-165. https://doi.org/10.1111/j.1095-8312.1986.tb01752.x
- Heaney, L. R., Balete, D. S., Duya, M. R. M., Duya, M. V., Jansa, S. A., Steppan, S. J., & Rickart, E. A. (2016). Doubling diversity: A cautionary tale of previously unsuspected mammalian diversity on a tropical oceanic island. Front Biogeogr, 8(2). https://doi.org/ 10.21425/F5FBG29667
- Hinojosa, J. C., Koubinova, D., Szenteczki, M. A., Pitteloud, C., Dinca, V., Alvarez, N., & Vila, R. (2019). A mirage of cryptic species: Genomics uncover striking mitonuclear discordance in the butterfly Thymelicus sylvestris. Mol Ecol, 28(17), 3857-3868. https://doi.org/10.1111/mec.15153
- Hosner, P. A., Campillo, L. C., Andersen, M. J., Sanchez-Gonzalez, L. A., Oliveros, C. H., Urriza, R. C., & Moyle, R. G. (2018). An integrative species delimitation approach reveals fine-scale endemism and substantial unrecognized avian diversity in the Philippine Archipelago. Conserv Genet, 19, 1153-1168. https://doi.org/10.1007/ s10592-018-1085-4
- Hosner, P. A., Nyari, A. S., & Moyle, R. G. (2013). Water barriers and intra-island isolation contribute to diversification in the insular Aethopyga sunbirds (Aves: Nectariniidae). J Biogeogr, 40(6), 1094-1106. https://doi.org/10.1111/jbi.12074
- Hurst, G. D., & Jiggins, F. M. (2005). Problems with mitochondrial DNA as a marker in population, phylogeographic and phylogenetic studies: The effects of inherited symbionts. Proc R Soc B, 272(1572), 1525-1534. https://doi.org/10.1098/ rspb.2005.3056
- Inger, R. F. (1954). Systematics and zoogeography of Philippine Amphibia. https://doi.org/10.5962/ bhl.title.5571
- Kahle, D. J., & Wickham, H. (2013). ggmap: Spatial visualization with ggplot2. R J., 5(1), 144. https://doi.org/10.32614/RJ-2013-014
- Kaltenbach, T., Garces, J. M., & Gattolliat, J. L. (2020). The success story of Labiobaetis Novikova & Kluge in the Philippines (Ephemeroptera, Baetidae), with description of 18 new species. ZooKeys, 1002, 1-114. https://doi.org/10.3897/zookeys.1002.58017
- Khan, Z. R., Litsinger, J. A., Barrion, A. T., Villanueva, F. F. D., Fernandez, N. J., & Taylo, L. D. (1991). World Bibliography of Rice Stem Borers: 1794-1990. IRRI.
- Kim, Y., Qi, M., Wang, S., & Li, H. (2023). Taxonomy of the genus Calamotropha Zeller (Lepidoptera: Crambidae: Crambinae) from mainland China. Zootaxa, 5297(4), 451-482. https://doi.org/10.11646/ zootaxa.5297.4.1
- Komarek, A., & Freitag, H. (2020). Taxonomic revision of Agraphydrus Regimbart, 1903 V. Philippine species and their first DNA barcodes. Koleopterol Rundsch, 90, 201-242.
- Koren, T. (2021). Further additions to the grass moth (Lepidoptera: Crambidae) fauna of Croatia. Nat Croat, 1(30), 243-250. https://doi.org/10.20302/ NC.2021.30.15
- Landry, B. (1995). A phylogenetic analysis of the major lineages of the Crambinae and of the genera of Crambini of North America (Lepidoptera: Pyralidae) (Memoirs on Entomology International). Associated Publishers.
- Landry, B., Leger, T., & Nuss, M. (2020). Case 3819-EUCHROMIINI Leger, Landry & Nuss, 2019 (Insecta, Lepidoptera, CRAMBIDAE) and EUCHROMIINAE Butler, 1876 (Insecta, Lepidoptera, EREBIDAE): Proposed resolution of homonymy by emending the former to EUCHROMIUSINI. Bull Zool Nomencl, 77(1), 83-85. https://doi.org/10.21805/ bzn.v77.a027
- Leger, T., Kehlmaier, C., Vairappan, C. S., & Nuss, M. (2020). Twenty-six new species of Hoploscopa (Lepidoptera, Crambidae) from South-East Asia revealed by morphology and DNA barcoding. Zookeys, 907, 1-99. https://doi.org/10.3897/zookeys.907.36563
- Leger, T., Landry, B., & Nuss, M. (2019). Phylogeny, character evolution and tribal classification in Crambinae and Scopariinae. Syst Entomo, 44, 757-776. https://doi.org/10.1111/syen.12353
- Leger, T., Mally, R., Neinhuis, C., & Nuss, M. (2021). Refining the phylogeny of Crambidae with complete sampling of subfamilies (Lepidoptera, Pyraloidea). Zoologica Scripta, 50(1), 84-99. https://doi.org/ 10.1111/zsc.12452
- Li, W. C., Li, H. H., & Nuss, M. (2009). Notes on the genus Metaeuchromius Bleszynski (Lepidoptera: Crambidae: Crambinae) from China, with description of two new species. Zootaxa, 2287(1), 55-63. https://doi.org/10.11646/zootaxa.2287.1.3
- Li, W., & Li, H. (2012a). Review of the genus Calamotropha Zeller (Lepidoptera: Crambidae: Crambinae) from China, with descriptions of four new species. Journal of Natural History, 46(43-44), 2639-2664. https://doi.org/10.1080/ 00222933.2012.724719
- Li, W., & Li, H. (2012b). Taxonomic revision of the genus Glaucocharis Meyrick (Lepidoptera, Crambidae, Crambinae) from China, with descriptions of nine new species. Zootaxa, 3261(1), 1-32. https://doi.org/ 10.11646/zootaxa.3261.1.1
- Li, W., Li, H., & Nuss, M. (2010). Taxonomic revision and biogeography of Micraglossa Warren, 1891 from laurel forests in China (Insecta: Lepidoptera: Pyraloidea: Crambidae: Scopariinae). Arthropod Systematics & Phylogeny, 68(2), 159-180. https://doi.org/10.3897/asp.68.e31724
- Li, W., Li, H., & Nuss, M. (2012). Taxonomic revision of the genus Eudonia Billberg, 1820 from China (Lepidoptera: Crambidae: Scopariinae). Zootaxa, 3273, 1-27. https://doi.org/10.11646/zootaxa.3273.1.1
- Li, W., & Liu, D. (2013). Scoparia monticola Nuss, 1998 a new record for Chinese fauna (Lepidoptera: Crambidae, Scopariinae). Shilap-Rev Lepidopt., 41(164), 511-515.
- Litsinger, J. A., Barrion, A. T., Bandong, J. P., Canapi, B. L., Lumaban, M. D., Dela Cruz, C. G., Pantua, P. C., & Apostol, R. F. (2011). Philippine rice stemborers: A review. Philipp Entomol, 25, 1-47.
- Lohman, D. J., Ingram, K. K., Prawiradilaga, D. M., Winker, K., Sheldon, F. H., Moyle, R. G., Ng, P. K., Ong, P. S., Wang, L. K., & Braile, T. M. (2010). Cryptic genetic diversity in "widespread" Southeast Asian bird species suggests that Philippine avian endemism is gravely underestimated. Biological Conservation, 143(8), 1885-1890. https://doi.org/10.1016/ j.biocon.2010.04.042
- Lohse, K. (2009). Can mtDNA barcodes be used to delimit species? A response to Pons et al.(2006). Systematic Biology, 58(4), 439-442. https://doi.org/ 10.1093/sysbio/syp039
- Lopez-Vaamonde, C., Kirichenko, N., Cama, A., Doorenweerd, C., Godfray, H. C. J., Guiguet, A., Gomboc, S., Huemer, P., Landry, J. F., LaStuvka, A., LaStuvka, Z., Lee, K. M., Lees, D. C., Mutanen, M., van Nieukerken, E. J., Segerer, A. H., Triberti, P., Wieser, C., & Rougerie, R. (2021). Evaluating DNA Barcoding for Species Identification and Discovery in European Gracillariid Moths. Frontiers in Ecology and Evolution, 9. https://doi.org/10.3389/ fevo.2021.626752
- MacArthur, R. H., & Wilson, E. O. (1967). The Theory of Island Biogeography: By Robert H. MacArthur and Edward O. Wilson. Princeton University Press.
- Maddison, W. P., & Maddison, D. R. (2017). Mesquite: A modular system for evolutionary analysis (Version 3.31). http://www.mesquiteproject.org
- Maes, K. (2022). Chilo suppressalis (striped rice stem borer). In CABI Compendium: Vol. CABI Compendium. CABI International. https://doi.org/10.1079/ cabicompendium.12855
- Mey, W. (2003). Insular radiation of the genus Hydropsyche (Insecta, Trichoptera: Hydropsychidae) Pictet, 1834 in the Philippines and its implications for the biogeography of Southeast Asia. J Biogeogr, 30(2), 227-236. https://doi.org/10.1046/ j.1365-2699.2003.00830.x
- Munroe, E. (1958). The geographic distribution of the Scopariinae (Lepidoptera: Pyralidae). Proc 10th Int Congr Entomol, 1, 831-837.
- Myers, N., Mittermeier, R. A., Mittermeier, C. G., Da Fonseca, G. A., & Kent, J. (2000). Biodiversity hotspots for conservation priorities. Nature, 403(6772), 853. https://doi.org/10.1038/35002501
- Nuss, M. (1998). The Scopariinae and Heliothelinae stat. Rev. (Lepidoptera: Pyraloidea, Crambidae) of the Oriental Region -A revisional synopsis with descriptions of new species from the Philippines and Sumatra. Nachr Entomol Ver Apollo, suppl. 17, 475-528.
- Nuss, M. (1999). Revision der Gattungen der Scopariinae (Lepidoptera: Pyraloidea, Crambidae). Nova Suppl Entomol., Berlin, 13, 3-151.
- Nuss, M. (2002). Scoparia noacki sp. n. - A new snout moth from the Philippines (Lepidoptera: Pyraloidea, Crambidae). Nachr Entomol Ver Apollo, 23, 83-84.
- Nuss, M., Landry, B., Mally, R., Vegliante, F., Trankner, A., Bauer, F., Hayden, J., Segerer, A., Schouten, R., Li, H., Trofimova, T., Solis, M. A., De Prins, J., & Speidel, W. (2003-2023). Global Information System on Pyraloidea. - www.pyraloidea.org. Global Information System on Pyraloidea.
- Okano, M. (1962). The systematic study on the Japanese Crambinae (Lepidoptera, Pyralidae). Annual Report of the Gakugei Faculty of the Iwate University, Morioka, Japan, 20(3), 83-137.
- Ong, P. S., Afuang, L. E., & Rosell-Amball, R. G. (2002). Philippine biodiversity conservation priorities: A second iteration of the national biodiversity and action plan. DENR-Protected Areas and Wildlife Bureau, Conservation International Philippines. Biodiversity Conservation Program-UP CIDS, and the Foundation for the Philippine Environment.
- Paradis, E., Blomberg, S., Bolker, B., Brown, J., Claude, J., Cuong, H. S., Desper, R., & Didier, G. (2019). Package 'ape'. Analyses of Phylogenetics and Evolution. Version, 2(4), 47.
- Phillips, J. D., Gillis, D. J., & Hanner, R. H. (2019). Incomplete estimates of genetic diversity within species: Implications for DNA barcoding. Ecol Evol, 9(5), 2996-3010. https://doi.org/10.1002/ece3.4757
- Poltavsky, A. N., & Artokhin, K. S. (2015). Invasions by Chilo Zincken, 1817 to the south of European Russia (Lepidoptera: Crambidae). Shilap-Rev Lepidopt., 43(171), 461-465.
- Posa, M. R. C., Diesmos, A. C., Sodhi, N. S., & Brooks, T. M. (2008). Hope for threatened tropical biodiversity: Lessons from the Philippines. BioScience, 58(3), 231-240. https://doi.org/10.1641/ B580309
- Puillandre, N., Brouillet, S., & Achaz, G. (2021). ASAP: assemble species by automatic partitioning. Mol Ecol Resour, 21(2), 609-620. https://doi.org/ 10.1111/1755-0998.13281
- Puillandre, N., Lambert, A., Brouillet, S., & Achaz, G. J. M. E. (2012). ABGD, Automatic Barcode Gap Discovery for primary species delimitation. Mol Ecol, 21(8), 1864-1877. https://doi.org/10.1111/ j.1365-294X.2011.05239.x
- Regier, J. C., Mitter, C., Solis, M. A., Hayden, J. E., Landry, B., Nuss, M., Simonsen, T. J., Yen, S. H., Zwick, A., & Cummings, M. P. (2012). A molecular phylogeny for the pyraloid moths (Lepidoptera: Pyraloidea) and its implications for higher-level classification. Syst Ent, 37(4), 635-656. https://doi.org/10.1111/j.1365-3113.2012.00641.x
- Robinson, G. S. (1976). The preparation of slides of Lepidoptera genitalia with special reference to the Microlepidoptera. Entomologist's Gaz, 27, 127-132.
- Sasaki, A. (1998). Notes on the Scopariinae from Taiwan, with descriptions of nine new species. Tinea, Tokyo, 15(3), 191-201.
- Schneider, C. A., Rasband, W. S., & Eliceiri, K. W. (2012). NIH Image to ImageJ: 25 years of image analysis. Nat Methods, 9(7), 671-675. https://doi.org/ 10.1038/nmeth.2089
- Schouten, R. (1997). Revision of the genus Metaeuchromius Bleszynski (Lepidoptera: Pyralidae: Crambinae). Tijdschr Entomol, 140(1), 111-127.
- Song, S., Chen, F., & Wu, C. (2009). A review of the genus Gargela Walker in China, with descriptions of ten new species (Lepidoptera: Crambidae, Crambinae). Zootaxa, 2090, 40-56. https://doi.org/ 10.11646/zootaxa.2090.1.2
- Speidel, W. (1998). The genus Nymphicula Snellen [1888] in the Philippines (Lepidoptera; Crambidae; Acentropinae). Esperiana, 6, 536-538.
- Speidel, W. (2003). New species of aquatic moths from the Philippines (Lepidoptera, Crambidae). Insecta Koreana, 370(20), 7-49.
- Srivathsan, A., Lee, L., Katoh, K., Hartop, E., Kutty, S. N., Wong, J., Yeo, D., & Meier, R. (2021). ONTbarcoder and MinION barcodes aid biodiversity discovery and identification by everyone, for everyone. BMC Biology, 19, 217. https://doi.org/ 10.1186/s12915-021-01141-x
- Srivathsan, A., & Meier, R. (2012). On the inappropriate use of Kimura-2-parameter (K2P) divergences in the DNA-barcoding literature. Cladistics, 28(2), 190-194. https://doi.org/10.1111/ j.1096-0031.2011.00370.x
- Stamatakis, A. (2006). RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics, 22, 2688-2690. https://doi.org/10.1093/ bioinformatics/btl446
- Treadaway, C. G. (1995). Checklist of the butterflies of the Philippine Islands (Lepidoptera: Rhopalocera). Nachr Entomol Ver Apollo, 14, 7-118.
- Treadaway, C. G. (1998). Short introduction to Philippine natural and geological history and its relevance for Lepidoptera. Nachr Entomol Ver Apollo, 17, 7-16.
- Treadaway, C. G., & Schroder, H. G. (2012). Revised checklist of the butterflies of the Philippine Islands (Lepidoptera: Rhopalocera). Nachr Entomol Ver Apollo, 20, 1-64.
- Yang, J., Jie, L., & Li, W. (2019). Notes on the genus Gargela (Lepidoptera: Crambidae), with descriptions of two new species from China. J Nat Hist, 53(33-34), 2099-2104. https://doi.org/10.1080/ 00222933.2019.1692087