Biodiversity Literature Repository

Submit to community
Liberated Data
Published June 2, 2020 | Version v1
Journal article Restricted

Species clarification of the medicinal wood-inhabiting fungus Phylloporia (Hymenochaetales, Basidiomycota) in China

Creators

  • 1. State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China.
  • 2. Shandong Provincial Key Laboratory of Applied Mycology, Qingdao Agricultural University, Qingdao, Shandong 266109, China.
  • 3. State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China. & Institute of Applied Ecology, Chinese Academy of Sciences, Shenyang 110016, China.

Description

Jiang, Ji-Hang, Zhou, Lin-Jiang, Liu, Shi-Liang, Zhou, Li-Wei, Tian, Xue-Mei (2020): Species clarification of the medicinal wood-inhabiting fungus Phylloporia (Hymenochaetales, Basidiomycota) in China. Phytotaxa 446 (4): 209-219, DOI: 10.11646/phytotaxa.446.4.1, URL: http://dx.doi.org/10.11646/phytotaxa.446.4.1

Files

Restricted

The record is publicly accessible, but files are restricted to users with access.

Linked records

Additional details

Cites
Publication: 10.11646/phytotaxa.348.3.3 (DOI)
Publication: 10.1038/s41598-017-10376-0 (DOI)
Publication: 10.5248/113.171 (DOI)
Publication: 10.1007/s13225-010-0066-9 (DOI)
Publication: 10.1111/j.1439-0329.2007.00485.x (DOI)
Publication: 10.7872/crym/v36.iss4.2015.449 (DOI)
Publication: 10.1127/0029-5035/2007/0084-0409 (DOI)
Publication: 10.11646/phytotaxa.257.2.3 (DOI)
Publication: 10.7872/crym.v35.iss4.2014.313 (DOI)
Publication: 10.1080/10635150390235520 (DOI)
Publication: 10.1093/nar/gki198 (DOI)
Publication: 10.1093/molbev/mst010 (DOI)
Publication: 10.1080/21501203.2018.1500400 (DOI)
Publication: 10.1016/j.carbpol.2015.03.057 (DOI)
Publication: 10.1016/j.carbpol.2014.01.088 (DOI)
Publication: 10.1016/j.ijbiomac.2017.10.134 (DOI)
Publication: 10.1016/j.fct.2014.03.044 (DOI)
Publication: 10.1089/cmb.2009.0179 (DOI)
Publication: 10.1093/molbev/msn083 (DOI)
Publication: 10.3897/mycokeys.30.23235 (DOI)
Publication: 10.5962/bhl.title.47025 (DOI)
Publication: 10.1007/s11557-019-01495-1 (DOI)
Publication: 10.1093/sysbio/sys029 (DOI)
Publication: 10.1007/s13127-011-0056-0 (DOI)
Publication: 10.1093/bioinformatics/btl446 (DOI)
Publication: 10.1007/s11557-010-0707-0 (DOI)
Publication: 10.1128/JB.172.8.4238-4246.1990 (DOI)
Publication: 10.1007/s11557-019-01476-4 (DOI)
Publication: 10.1007/s11557-018-1391-8 (DOI)
Publication: 10.3852/14-298 (DOI)
Publication: 10.5091/plecevo.2017.1289 (DOI)
Publication: 10.1016/j.foodchem.2008.12.055 (DOI)
Publication: 10.1080/10590501.2018.1450201 (DOI)
Publication: 10.5248/124.361 (DOI)
Publication: 10.3852/14-254 (DOI)
Publication: 10.1127/nova_hedwigia/2014/0220 (DOI)
Publication: 10.1007/s11557-016-1200-1 (DOI)
Publication: 10.1016/j.fbr.2019.10.002 (DOI)
Publication: 10.3852/11-093 (DOI)
Publication: 10.1007/s13225-015-0335-8 (DOI)
Has part
Taxonomic treatment: 10.5281/zenodo.13877979 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/0393803BFFE15A3E7D85FF50FCAEB1D2 (URL)
Taxonomic treatment: 10.5281/zenodo.13877981 (DOI)
Taxonomic treatment: http://treatment.plazi.org/id/0393803BFFE05A3C7D85FF3AFF06B760 (URL)
Figure: 10.5281/zenodo.13877985 (DOI)
Figure: 10.5281/zenodo.13877987 (DOI)
Figure: 10.5281/zenodo.13877989 (DOI)
Figure: 10.5281/zenodo.13877991 (DOI)
Is source of
Dataset: https://www.gbif.org/dataset/c7e4a8d5-c486-4dfd-a3dc-cdbc5a8c10f0 (URL)

References

  • Anonymous (1955) Shen Nong Materia Medica, 102-200 AD (E. Han). Reprinted. People's Hygiene Press, Beijing, 514 pp.
  • Bittencourt, F., Sturmer, S.L., Reck, M.A. & Drechsler-Santos, E.R. (2019) Phylloporia minuta sp. nov.(Basidiomycota, Hymenochaetales): a remarkable species discovered in a small protected urban area of Atlantic Forest. Phytotaxa 348: 199-210. https://doi.org/10.11646/phytotaxa.348.3.3
  • Chen, M., Cheng, X., Sun, L., Liu, Y. & Li, W. (2015) Cultural characteristics of Phylloporia ribis grown on six different solid media. Acta Edulis Fungi 22: 37-39.
  • Chen, J., Zeng, X., Yang, Y.L., Xing, Y.M., Zhang, Q., Li, J.M., Ma, K., Liu, H.W. & Guo, S.X. (2017) Genomics and transcriptomic analyses reveal differential regulation of diverse terpenoid and polyketides secondary metabolites in Hericium erinaceus. Scientific Reports 7: 10151. https://doi.org/10.1038/s41598-017-10376-0
  • Cui, B.K., Yuan, H.S. & Dai, Y.C. (2010) Two new species of Phylloporia (Basidiomycota, Hymenochaetaceae) from China. Mycotaxon 113: 171-178. https://doi.org/10.5248/113.171
  • Dai, Y.C. (2010) Hymenochaetaceae (Basidiomycota) in China. Fungal Diversity 45: 131-343. https://doi.org/10.1007/s13225-010-0066-9
  • Dai, Y.C. (2018) Flora fungorum sinicorum. Vol 57. Hymenochaetales I. Science Press, Beijing, 232 pp.
  • Dai, Y.C., Cui, B.K., Yuan, H.S. & Li, B.D. (2007) Pathogenic wood-decaying fungi in China. Forest Pathology 37: 105-120. https://doi.org/10.1111/j.1439-0329.2007.00485.x
  • Decock, C., Yombiyeni, P. & Memiaghe, H. (2015) Hymenochaetaceae from the Guineo-Congolian rainforest: Phylloporia flabelliforma sp. nov. and Phylloporia gabonensis sp. nov., two undescribed species from Gabon. Cryptogamie Mycologie 36: 449-467 https://doi.org/10.7872/crym/v36.iss4.2015.449
  • Douanla-Meli, C., Ryvarden, L. & Langer, E. (2007) Studies of tropical African pore fungi (Basidiomycota, Aphyllophorales): three new species from Cameroon. Nova Hedwigia 84: 409-420. https://doi.org/10.1127/0029-5035/2007/0084-0409
  • Esquivel, R.E. & Carranza, J. (1996) Patogenicidad de Phylloporia chrysita (Aphyllophorales: Hymenochaetaceae) sobre Erythrochiton gymnanthus (Rutaceae). Revista de Biologia Tropical 44 (Suppl 4): 137-145.
  • Ferreira-Lopes, V., Robledo, G.L., Reck, M.A., Goes-Neto, A. & Drechsler-Santos, E.R. (2016) Phylloporia spathulata sensu stricto and two new South American stipitate species of Phylloporia (Hymenochaetaceae). Phytotaxa 257: 133-148. https://doi.org/10.11646/phytotaxa.257.2.3
  • Gafforov, Y., Tomsovsky, M., Langer, E. & Zhou, L.W. (2014) Phylloporia yuchengii sp. nov. (Hymenochaetales, Basidiomycota) from Western Tien Shan Mountains of Uzbekistan based on phylogeny and morphology. Cryptogamie Mycologie 35: 313-322. https://doi.org/10.7872/crym.v35.iss4.2014.313
  • Guindon, S. & Gascuel, O. (2003) A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biology 52: 696-704. https://doi.org/10.1080/10635150390235520
  • Karsten, P.A. (1879) Symbolae ad mycologiam Fennicam. VI. Meddelanden af Societas pro Fauna et Flora Fennica 5: 15-46.
  • Karsten, P.A. (1881) Enumeratio Boletinearum et Polyporearum Fennicarum, systemate novo dispositarum. Revue Mycologique Toulouse 3 (9): 16-19.
  • Katoh, K., Kuma, K., Toh, H. & Miyata, T. (2005) MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Research 33: 511-518. https://doi.org/10.1093/nar/gki198
  • Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution 30: 772-780. https://doi.org/10.1093/molbev/mst010
  • Li, G.J., Zhao, R.L., Zhang, C.L. & Lin, F.C. (2019)A preliminary DNA barcode selection for the genus Russula (Russulales, Basidiomycota). Mycology 10: 61-74. https://doi.org/10.1080/21501203.2018.1500400
  • Liu, Y., Liu, C., Jiang, H., Zhou, H., Li, P. & Wang, F. (2015) Isolation, structural characterization and neurotrophic activity of a polysaccharide from Phellinus ribis. C arbohydrate Polymers 127: 145-151. https://doi.org/10.1016/j.carbpol.2015.03.057
  • Liu, Y., Liu, Y., Jiang, H., Xu, L., Cheng, Y., Wang, P.G. & Wang, F. (2014) Preparation, antiangiogenic and antitumoral activities of the chemically sulfated glucan from Phellinus ribis. C arbohydrate Polymers 106: 42-48. https://doi.org/10.1016/j.carbpol.2014.01.088
  • Liu, Y., Xu, J., Zong, A., Wang, J., Liu, Y., Jia, W., Jin, J., Yan, G. & Zhang, Y. (2018) Anti-angiogenic activity and mechanism of a chemically sulfated natural glucan from Phellinus ribis. International Journal of Biological Macromolecules 107: 2475-2483. https://doi.org/10.1016/j.ijbiomac.2017.10.134
  • Liu, Z., Guo, S.F., Sun, Q., Feng, S. & Li, X. (2017) Comparative study on polysaccharide content and its antioxidant activity of Phylloporia ribis (Schumach.: Fr.) Ryvarden of different years. Shandong Agricultural Sciences 49 (1): 73-76.
  • Lu, L., Guo, J., Yan, Y., Yao, W., Xie, W., Cheng, D., Li, H. & Fan, Y. (2018) Effects of sporocarp and fermentative hyphae of Phylloporia ribis on immunoregulation in mice: a comparative study. Chinese Journal of Public Health 34: 373-376. https://doi.org/10.1016/j.fct.2014.03.044
  • Montagne, C. & Berkeley, M.J. (1844) Decades of fungi: decade II. London Journal of Botany 3: 329-337.
  • Murrill, W.A. (1904) A new polyporoid genus from South America. Torreya 4: 141-142.
  • Murrill, W.A. (1907) Polyporaceae, Part 1. North American Flora 9 (1): 1-72.
  • Pattengale, N.D., Alipour, M., Bininda-Emonds, O.R.P., Moret, B.M.E. & Stamatakis, A. (2010) How many bootstrap replicates are necessary? Journal of Computational Biology 17: 337-354. https://doi.org/10.1089/cmb.2009.0179
  • Persoon, C.H. (1797) Commentatio de fungis clavaeformibus. Apud Petrum Philippum Wolf, Lipsiae, 124 pp.
  • Posada, D. (2008) jModelTest: phylogenetic model averaging. Molecular Biology and Evolution 25: 1253-1256. https://doi.org/10.1093/molbev/msn083
  • Qin, W.M., Wang, X.W., Sawahata, T. & Zhou, L.W. (2018) Phylloporia lonicerae (Hymenochaetales, Basidiomycota), a new species on Lonicera japonica from Japan and an identification key to worldwide species of Phylloporia. MycoKeys 30: 17-30. https://doi.org/10.3897/mycokeys.30.23235
  • Quelet, L. (1886) Enchiridion Fungorum in Europa media et praesertim in Gallia Vigentium. Octave Doin, Paris, 352 pp. https://doi.org/10.5962/bhl.title.47025
  • Rajchenberg, M., Pildain, M.B., Madriaga, D.C., de Errasti, A., Riquelme, C. & Becerra, J. (2019) New poroid Hymenochaetaceae (Basidiomycota, Hymenochaetales) from Chile. Mycological Progress 18: 865-877. https://doi.org/10.1007/s11557-019-01495-1
  • Ronquist, F., Teslenko, M., van der Mark, P., Ayres, D., Darling, A., Hohna, S., Larget, B., Liu, L., Suchard, M.A & Huelsenbeck, J.P. (2012) MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Systematic Biology 61: 539-542. https://doi.org/10.1093/sysbio/sys029
  • Rostrup, E. (1902) Flora of Koh Chang. Contributions to the knowledge of the vegetation of the gulf of Siam. Fungi. Botanisk Tidsskrift 24: 355-363.
  • Ryvarden, L. (1976) Type studies in the Polyporaceae 8. Species described by E. Rostrup. Botanisk tidsskrift 71: 100-102.
  • Ryvarden, L. (1978) The Polyporaceae of North Europe 2. Fungiflora, Oslo, pp. 215-507.
  • Silvestro, D. & Michalak, I. (2012) raxmlGUI: a graphical front end for RAxML. Organisms, Diversity & Evolution 12: 335-337. https://doi.org/10.1007/s13127-011-0056-0
  • Stamatakis, A. (2006) RAxML-VI-HPC: maximum likelihood based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22: 2688-2690. https://doi.org/10.1093/bioinformatics/btl446
  • Valenzuela, R., Raymundo, T., Cifuentes, J., Castillo, G., Amalfi, M. & Decock, C. (2011) Two undescribed species of Phylloporia from Mexico based on morphological and phylogenetic evidence. Mycological Progress 10: 341-349. https://doi.org/10.1007/s11557-010-0707-0
  • Vilgalys, R. & Hester, M. (1990) Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4238-4246. https://doi.org/10.1128/JB.172.8.4238-4246.1990
  • Wu, F., Ren, G.J., Wang, L., Oliveira-Filho, J.R.C., Gibertoni, T.B. & Dai, Y.C. (2019) An updated phylogeny and diversity of Phylloporia (Hymenochaetales): eight new species and keys to species of the genus. Mycological Progress 18: 615-639. https://doi.org/10.1007/s11557-019-01476-4
  • Wu, S.H., Yu, Z.H., Dai, Y.C., Chen, C.T., Su, C.H., Chen, L.C., Hsu, W.C. & Hwang, G.Y. (2004) Taiwanofungus, a polypore new genus. Fungal Science 19 (3-4): 109-116.
  • Yang, L., Guan, R., Shi, Y., Ding, J., Dai, R., Ye, W., Xu, K., Chen, Y., Shen, L., Liu, Y., Ding, F., He, C. & Meng, H. (2018) Comparative genome and transcriptome analysis reveal the medicinal basis and environmental adaptation of artificially cultivated Taiwanofungus camphoratus. Mycological Progress 17: 871-883. https://doi.org/10.1007/s11557-018-1391-8
  • Yombiyeni, P., Balezi, A., Amalfi, M. & Decock, C. (2015) Hymenochaetaceae from the Guineo-Congolian rainforest: three new species of Phylloporia based on morphological, DNA sequences and ecological data. Mycologia 107: 996-1011. https://doi.org/10.3852/14-298
  • Yombiyeni, P. & Decock, C. (2017) Hymenochaetaceae (Hymenochaetales) from the Guineo-Congolian phytochorion: Phylloporia littoralis sp. nov. from coastal vegetation in Gabon, with an identification key to the local species. Plant Ecology and Evolution 150: 160-172. https://doi.org/10.5091/plecevo.2017.1289
  • Yuan, C., Huang, X., Cheng, L., Bu, Y., Liu, G., Yi, F., Yang, Z. & Song, F. (2009) Evaluation of antioxidant and immune activity of Phellinus ribis glucan in mice. Food Chemistry 115: 581-584. https://doi.org/10.1016/j.foodchem.2008.12.055
  • Zhao, H., Zhang, M., Liu, Q., Wang, X., Zhao, R., Geng, Y., Wong, T., Li, S. & Wang, X. (2018) A comprehensive screening shows that ergothioneine is the most abundant antioxidant in the wild macrofungus Phylloporia ribis Ryvarden. Journal of Environmental Science and Health 36: 98-111. https://doi.org/10.1080/10590501.2018.1450201
  • Zhou, L.W. (2013) Phylloporia tiliae sp. nov. from China. Mycotaxon 124:361-365. https://doi.org/10.5248/124.361
  • Zhou, L.W. (2015a) Four new species of Phylloporia (Hymenochaetales, Basidiomycota) from tropical China with a key to Phylloporia species worldwide. Mycologia 107: 1184-1192. https://doi.org/10.3852/14-254
  • Zhou, L.W. (2015b) Phylloporia osmanthi and P. terrestris spp. nov. (Hymenochaetales, Basidiomycota) from Guangxi, South China. Nova Hedwigia 100: 239-249. https://doi.org/10.1127/nova_hedwigia/2014/0220
  • Zhou, L.W. (2016) Phylloporia minutipora and P. radiata spp. nov. (Hymenochaetales, Basidiomycota) from China and a key to worldwide species of Phylloporia. Mycological Progress 15: 57. https://doi.org/10.1007/s11557-016-1200-1
  • Zhou, L.W. (2020) Systematics is crucial for the traditional Chinese medicinal studies and industry of macrofungi. Fungal Biology Reviews 34: 10-12. https://doi.org/10.1016/j.fbr.2019.10.002
  • Zhou, L.W. & Dai, Y.C. (2012) Phylogeny and taxonomy of Phylloporia (Hymenochaetales): new species and a worldwide key to the genus. Mycologia 104: 211-222. https://doi.org/10.3852/11-093
  • Zhou, L.W., Vlasak, J., Decock, C., Assefa, A., Stenlid, J., Abate, D., Wu, S.H. & Dai, Y.C. (2016) Global diversity and taxonomy of the Inonotus linteus complex (Hymenochaetales, Basidiomycota): Sanghuangporus gen. nov., Tropicoporus excentrodendri and T. guanacastensis gen. et spp. nov., and 17 new combinations. Fungal Diversity 77: 335-347. https://doi.org/10.1007/s13225-015-0335-8